RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SGO2Q562F6 1265 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 RNF43Q68DV7 783 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 CYP2U1Q7Z449 544 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 ARHGEF19Q8IW93 802 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 CHPFQ8IZ52 775 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 UBR7Q8N806 425 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 ANKRD52Q8NB46 1076 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 CCDC26Q8TAB7 109 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 OLIG1Q8TAK6 271 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 TFAP2BQ92481 460 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 XPO6Q96QU8 1125 aaKnown RBP18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 VPS45Q9NRW7 570 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 CALCOCO1Q9P1Z2 691 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 COQ4Q9Y3A0 265 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 A0A1W2PQF6 199 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 PPP1R3GB7ZBB8 358 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 MAP3K13O43283 966 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 TSPAN3O60637 253 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 CISD3P0C7P0 127 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 BRD2P25440 801 aaKnown RBP18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 LRRC63Q05C16 580 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 MAP7D1Q3KQU3 841 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 RAB41Q5JT25 222 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 TMEM270Q6UE05 265 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 RRAGAQ7L523 313 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 CACUL1Q86Y37 369 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 PPM1KQ8N3J5 372 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 CLEC4CQ8WTT0 213 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 TIGD1Q96MW7 591 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 ZSWIM1Q9BR11 485 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 TMEM74BQ9NUR3 256 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 MARCH2Q9P0N8 246 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 AGO1Q9UL18 857 aaKnown RBP18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 PCDHB4Q9Y5E5 795 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 PCDHGA5Q9Y5G8 931 aa18.23■□□□□ 0.51
ECHDC1-216ENST00000479525 LNP1A1A4G5 178 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 C4orf47A7E2U8 309 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 PSMA7O14818 248 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 MSI1O43347 362 aaKnown RBP18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 GABBR2O75899 941 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 ZBED1O96006 694 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 NDUFV2P19404 249 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 NTSR1P30989 418 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 BCAT1P54687 386 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 GEN1Q17RS7 908 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 TTI2Q6NXR4 508 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 SORCS1Q8WY21 1168 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 LRRC4Q9HBW1 653 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 CLIC5Q9NZA1 410 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 MARK1Q9P0L2 795 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 CYP8B1Q9UNU6 501 aa18.22■□□□□ 0.51
ECHDC1-216ENST00000479525 YJEFN3A6XGL0 299 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 E7ENQ6 273 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 GIPC1O14908 333 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 XPO1O14980 1071 aaKnown RBP18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 PSEN1P49768 467 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 IRX4P78413 519 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 BST2Q10589 180 aaKnown RBP18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 STIM1Q13586 685 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 FYB2Q5VWT5 728 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 KLHDC10Q6PID8 442 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 FMNL3Q8IVF7 1028 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 IPO4Q8TEX9 1081 aaKnown RBP18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 SPACA7Q96KW9 195 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 NT5C1BQ96P26 610 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 DNAI2Q9GZS0 605 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 WDR35Q9P2L0 1181 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 HESX1Q9UBX0 185 aa18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 CNOT1A5YKK6 2376 aaKnown RBP18.21■□□□□ 0.51
ECHDC1-216ENST00000479525 O00370 1275 aa18.2■□□□□ 0.5
ECHDC1-216ENST00000479525 ADRB1P08588 477 aa18.2■□□□□ 0.5
ECHDC1-216ENST00000479525 ITPKAP23677 461 aa18.2■□□□□ 0.5
ECHDC1-216ENST00000479525 UAP1L1Q3KQV9 507 aa18.2■□□□□ 0.5
ECHDC1-216ENST00000479525 KIAA1324Q6UXG2 1013 aaKnown RBP18.2■□□□□ 0.5
ECHDC1-216ENST00000479525 LMO3Q8TAP4 145 aa18.2■□□□□ 0.5
ECHDC1-216ENST00000479525 DHTKD1Q96HY7 919 aaPredicted RBP18.2■□□□□ 0.5
ECHDC1-216ENST00000479525 HOOK1Q9UJC3 728 aaKnown RBP18.2■□□□□ 0.5
ECHDC1-216ENST00000479525 CKAP5Q14008 2032 aa18.2■□□□□ 0.5
ECHDC1-216ENST00000479525 ASCC3Q8N3C0 2202 aaKnown RBP18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 M0QYV0 167 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 TM4SF5O14894 197 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 VDRP11473 427 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 SGSHP51688 502 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 MFAP3P55082 362 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 SLC8A3P57103 927 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 COG7P83436 770 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 RPL6Q02878 288 aaKnown RBP18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 MORC3Q14149 939 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 CAMK4Q16566 473 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 HSF5Q4G112 596 aaPredicted RBP18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 N4BP2L1Q5TBK1 243 aaPredicted RBP18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 LPCAT2Q7L5N7 544 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 TADA2BQ86TJ2 420 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 CREBRFQ8IUR6 639 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 SIX6OS1Q8N1H7 587 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 TTC39CQ8N584 583 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 IPO9Q96P70 1041 aaKnown RBP18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 CD248Q9HCU0 757 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 STRIP2Q9ULQ0 834 aa18.19■□□□□ 0.5
ECHDC1-216ENST00000479525 MUC22E2RYF6 1773 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms