RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 PLK2Q9NYY3 685 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 TBC1D14Q9P2M4 693 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 DNMT3LQ9UJW3 386 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 USP18Q9UMW8 372 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 EP300Q09472 2414 aaPredicted RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 ZNF292O60281 2723 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 SLC12A8A0AV02 714 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 TBC1D3BA6NDS4 549 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 K7EQS6 105 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 XPO1O14980 1071 aaKnown RBP8.69□□□□□ -1.02
ERCC8-205ENST00000477893 MSI1O43347 362 aaKnown RBP8.69□□□□□ -1.02
ERCC8-205ENST00000477893 LILRB5O75023 590 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 KAT7O95251 611 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 KLF8O95600 359 aaPredicted RBP8.69□□□□□ -1.02
ERCC8-205ENST00000477893 ZBED1O96006 694 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 APODP05090 189 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 CORO1AP31146 461 aaKnown RBP8.69□□□□□ -1.02
ERCC8-205ENST00000477893 WASP42768 502 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 GAD2Q05329 585 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 DMC1Q14565 340 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 ARHGAP44Q17R89 818 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 C10orf76Q5T2E6 689 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 EMC10Q5UCC4 262 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 TADA2BQ86TJ2 420 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 SCUBE3Q8IX30 993 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 ALLCQ8N6M5 410 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 TSTD1Q8NFU3 115 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 LMO3Q8TAP4 145 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 CLEC4CQ8WTT0 213 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 NELL1Q92832 810 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 ACDQ96AP0 544 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 FAXDC2Q96IV6 333 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 KREMEN1Q96MU8 473 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 MED15Q96RN5 788 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 ZSWIM1Q9BR11 485 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 BBS2Q9BXC9 721 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 FAM126AQ9BYI3 521 aaPredicted RBP8.69□□□□□ -1.02
ERCC8-205ENST00000477893 MIS12Q9H081 205 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 UBE2TQ9NPD8 197 aaPredicted RBP8.69□□□□□ -1.02
ERCC8-205ENST00000477893 ACP6Q9NPH0 428 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 ST7Q9NRC1 585 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 DNAJC17Q9NVM6 304 aaKnown RBP8.69□□□□□ -1.02
ERCC8-205ENST00000477893 MARCH2Q9P0N8 246 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 GMEB2Q9UKD1 530 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 INVSQ9Y283 1065 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 USP3Q9Y6I4 520 aa8.69□□□□□ -1.02
ERCC8-205ENST00000477893 PTPRZ1P23471 2315 aaPredicted RBP8.68□□□□□ -1.02
ERCC8-205ENST00000477893 FAM186AA6NE01 2351 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 YJEFN3A6XGL0 299 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 E7ENQ6 273 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 DCLK1O15075 740 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 P4HA2O15460 535 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 GREM1O60565 184 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 TULP3O75386 442 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 RPP40O75818 363 aaKnown RBP8.68□□□□□ -1.02
ERCC8-205ENST00000477893 STC2O76061 302 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 APBB3O95704 486 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 PAEPP09466 180 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 SETSIPP0DME0 302 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
ERCC8-205ENST00000477893 SLC9A1P19634 815 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 PLA2G4AP47712 749 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 RPIAP49247 311 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 DGKEP52429 567 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 SPEM2Q0P670 501 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 CCDC6Q16204 474 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 FBXO43Q4G163 708 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 RAB41Q5JT25 222 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 GRAMD4Q6IC98 578 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 ANO7Q6IWH7 933 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 DENND1BQ6P3S1 775 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 DENND1CQ8IV53 801 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 FMNL3Q8IVF7 1028 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 ARHGAP18Q8N392 663 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 MLKLQ8NB16 471 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 TXNDC5Q8NBS9 432 aaKnown RBP8.68□□□□□ -1.02
ERCC8-205ENST00000477893 USP33Q8TEY7 942 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 RNF139Q8WU17 664 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 LMBRD1Q9NUN5 540 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 BCCIPQ9P287 314 aaKnown RBP eCLIP8.68□□□□□ -1.02
ERCC8-205ENST00000477893 DEC1Q9P2X7 70 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 SFMBT1Q9UHJ3 866 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 STRIP2Q9ULQ0 834 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.68□□□□□ -1.02
ERCC8-205ENST00000477893 ATG2BQ96BY7 2078 aa8.68□□□□□ -1.02
ERCC8-205ENST00000477893 TCRBV21S2A2A0A5A6 115 aa8.67□□□□□ -1.02
ERCC8-205ENST00000477893 TTC24A2A3L6 582 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-205ENST00000477893 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-205ENST00000477893 SGK1O00141 431 aa8.67□□□□□ -1.02
ERCC8-205ENST00000477893 HOXC11O43248 304 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-205ENST00000477893 THAP12O43422 761 aa8.67□□□□□ -1.02
ERCC8-205ENST00000477893 TSPAN3O60637 253 aa8.67□□□□□ -1.02
ERCC8-205ENST00000477893 LETM1O95202 739 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-205ENST00000477893 PAPSS2O95340 614 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-205ENST00000477893 KLKB1P03952 638 aa8.67□□□□□ -1.02
ERCC8-205ENST00000477893 PNMA6AP0CW24 399 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-205ENST00000477893 TYRP14679 529 aa8.67□□□□□ -1.02
ERCC8-205ENST00000477893 GNA15P30679 374 aa8.67□□□□□ -1.02
ERCC8-205ENST00000477893 GBP1P32455 592 aa8.67□□□□□ -1.02
ERCC8-205ENST00000477893 GRIA2P42262 883 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms