RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CNTNAP2Q9UHC6 1331 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 PTPRDP23468 1912 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 A0A087WWV3 80 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 NPEPPSL1A6NEC2 478 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 GPR42O15529 346 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 B4GALT5O43286 388 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 TSPAN1O60635 241 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 GLUD1P00367 558 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 CPP00450 1065 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 EDN1P05305 212 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 URODP06132 367 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 C8BP07358 591 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 IFNAR1P17181 557 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 AKAP5P24588 427 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 GNA11P29992 359 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 PDIA3P30101 505 aaKnown RBP5.08□□□□□ -1.6
CKS1B-207ENST00000477676 HOXC13P31276 330 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 MLH1P40692 756 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 OR1G1P47890 313 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 GLUD2P49448 558 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 RAB27AP51159 221 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 EVCP57679 992 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 STARD6P59095 220 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 PTENP60484 403 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 CCT2P78371 535 aaKnown RBP5.08□□□□□ -1.6
CKS1B-207ENST00000477676 SPIRE1Q08AE8 756 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 KCNAB2Q13303 367 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 TOB2Q14106 344 aaPredicted RBP5.08□□□□□ -1.6
CKS1B-207ENST00000477676 FHL2Q14192 279 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 NAB2Q15742 525 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 SMN1Q16637 294 aaKnown RBP5.08□□□□□ -1.6
CKS1B-207ENST00000477676 DCLRE1AQ6PJP8 1040 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 CD300LGQ6UXG3 332 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 RSPO2Q6UXX9 243 aaPredicted RBP5.08□□□□□ -1.6
CKS1B-207ENST00000477676 CEP68Q76N32 757 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 GET4Q7L5D6 327 aaPredicted RBP5.08□□□□□ -1.6
CKS1B-207ENST00000477676 FBXL16Q8N461 479 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 ITFG1Q8TB96 612 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 URGCPQ8TCY9 931 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 KCNG4Q8TDN1 519 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 RUBCNQ92622 972 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 NELL1Q92832 810 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 HAS1Q92839 578 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 CLSTN3Q9BQT9 956 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 SLC26A6Q9BXS9 759 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 RNF26Q9BY78 433 aaPredicted RBP5.08□□□□□ -1.6
CKS1B-207ENST00000477676 PLA2G2FQ9BZM2 168 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 TMEM168Q9H0V1 697 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 SEMA4AQ9H3S1 761 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 NXF3Q9H4D5 531 aaKnown RBP5.08□□□□□ -1.6
CKS1B-207ENST00000477676 GJB4Q9NTQ9 266 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 HCFC1R1Q9NWW0 138 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 FBLN5Q9UBX5 448 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 TCEAL9Q9UHQ7 104 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 FBXW11Q9UKB1 542 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 NAP1L2Q9ULW6 460 aaPredicted RBP5.08□□□□□ -1.6
CKS1B-207ENST00000477676 NUP210Q8TEM1 1887 aaPredicted RBP5.08□□□□□ -1.6
CKS1B-207ENST00000477676 MYOFQ9NZM1 2061 aa5.08□□□□□ -1.6
CKS1B-207ENST00000477676 ANAPC1Q9H1A4 1944 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 DDX3XO00571 662 aaKnown RBP eCLIP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 PTGESO14684 152 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 HGSO14964 777 aaPredicted RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 TDGF1P13385 188 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 ARF4P18085 180 aaPredicted RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 RPS6KB1P23443 525 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 HOXC12P31275 282 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 QARSP47897 775 aaKnown RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 NASPP49321 788 aaPredicted RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 DNM2P50570 870 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 ATXN1P54253 815 aaKnown RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 PSMC5P62195 406 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 CDC42EP1Q00587 391 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 MBTD1Q05BQ5 628 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 PPP2R5CQ13362 524 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 CAPSQ13938 189 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 BMS1Q14692 1282 aaKnown RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 EMC2Q15006 297 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 SF3A1Q15459 793 aaKnown RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 INF2Q27J81 1249 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 BMP2KLQ5H9B9 411 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 FUT10Q6P4F1 479 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 TSSK4Q6SA08 328 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 CYP26C1Q6V0L0 522 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 SRGAP1Q7Z6B7 1085 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 GRASPQ7Z6J2 395 aaPredicted RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 RNF149Q8NC42 400 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 ZBTB44Q8NCP5 570 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 HASPINQ8TF76 798 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 CCDC12Q8WUD4 166 aaPredicted RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 HDAC7Q8WUI4 952 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 RSPH1Q8WYR4 309 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 DIO2Q92813 273 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 FGF13Q92913 245 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 PGBD4Q96DM1 585 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 TOE1Q96GM8 510 aaKnown RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 DYDC2Q96IM9 177 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 CHAMP1Q96JM3 812 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 CEP170P1Q96L14 293 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 JAKMIP1Q96N16 626 aaKnown RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 KXD1Q9BQD3 176 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms