RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FAM163BP0C2L3 166 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 ATXN1LP0C7T5 689 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 CD58P19256 250 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 CASP1P29466 404 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 OXTRP30559 389 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 HOXD13P35453 343 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 PIK3CAP42336 1068 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 IL12RB1P42701 662 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 PLA2G4AP47712 749 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 CSNK1EP49674 416 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 TPMTP51580 245 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 NDST1P52848 882 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 IL9RQ01113 521 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 EFEMP1Q12805 493 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 SUZ12Q15022 739 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 SNX30Q5VWJ9 437 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 LAYNQ6UX15 382 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 SERPINA13PQ6UXR4 307 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 PAQR9Q6ZVX9 377 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 RSRC2Q7L4I2 434 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 GPRIN1Q7Z2K8 1008 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 ANKS1BQ7Z6G8 1248 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 ADAT2Q7Z6V5 191 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 TADA2BQ86TJ2 420 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 TMPRSS6Q8IU80 811 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 GALNT15Q8N3T1 639 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 C12orf29Q8N999 325 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 ZMIZ2Q8NF64 920 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 ENGASEQ8NFI3 743 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 PIP4K2CQ8TBX8 421 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 ZNF507Q8TCN5 953 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 DDI1Q8WTU0 396 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 SORCS1Q8WY21 1168 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 CRELD1Q96HD1 420 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 USP28Q96RU2 1077 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 CDC6Q99741 560 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 MKRN2Q9H000 416 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 SDCBP2Q9H190 292 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 XYLT2Q9H1B5 865 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 BLZF1Q9H2G9 400 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 MMRN2Q9H8L6 949 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 SLC39A2Q9NP94 309 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 ITM2CQ9NQX7 267 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 COMMD8Q9NX08 183 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 WSB2Q9NYS7 404 aaPredicted RBP7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 MARK1Q9P0L2 795 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 TFIP11Q9UBB9 837 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 DNMT3LQ9UJW3 386 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 UBE4BO95155 1302 aa7.02□□□□□ -1.28
RTFDC1-206ENST00000477485 TRABD2BA6NFA1 517 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 LRRIQ3A6PVS8 624 aaPredicted RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 KCNK3O14649 394 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 STC2O76061 302 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 FSBPO95073 299 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 STAU1O95793 577 aaKnown RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 CISD3P0C7P0 127 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 ZDHHC11BP0C7U3 371 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 RALAP11233 206 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 HLA-EP13747 358 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 PRKCHP24723 683 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 CORO1AP31146 461 aaKnown RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 AFMP43652 599 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 ABCG1P45844 678 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 AFF3P51826 1226 aaKnown RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 MFAP3P55082 362 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 ZNF234Q14588 700 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 SLC39A14Q15043 492 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 TEAD4Q15561 434 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 GEN1Q17RS7 908 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 FOXD4L6Q3SYB3 417 aaPredicted RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 FNDC3BQ53EP0 1204 aaKnown RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 SPOPLQ6IQ16 392 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 FOXD4L3Q6VB84 417 aaPredicted RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 EPM2AIP1Q7L775 607 aaPredicted RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 ZNF366Q8N895 744 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 CADM4Q8NFZ8 388 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 GANCQ8TET4 914 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 CYFIP2Q96F07 1278 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 BBC3Q96PG8 261 aaPredicted RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 NUP58Q9BVL2 599 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 IMPG2Q9BZV3 1241 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 NMUR1Q9HB89 426 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 CD248Q9HCU0 757 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 CYLDQ9NQC7 956 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 OSER1Q9NX31 292 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 USP36Q9P275 1121 aaKnown RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 FTSJ1Q9UET6 329 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 SCML2Q9UQR0 700 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 BTBD3Q9Y2F9 522 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 PCDHA5Q9Y5H7 936 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 SNX11Q9Y5W9 270 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 APC2O95996 2303 aa7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 URB1O60287 2271 aaKnown RBP7.02□□□□□ -1.29
RTFDC1-206ENST00000477485 FAM92AA1XBS5 289 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 FAM47DPA6NHR8 397 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 METTL12A8MUP2 240 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 PLK4O00444 970 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 SPTLC2O15270 562 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 STX6O43752 255 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 TSPAN3O60637 253 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms