RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 LSM7Q9UK45 103 aaKnown RBP12.84□□□□□ -0.35
PRKD3-209ENST00000477132 PRR23AA6NEV1 266 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 PAPSS1O43252 624 aaPredicted RBP12.83□□□□□ -0.36
PRKD3-209ENST00000477132 LILRB5O75023 590 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 PAPSS2O95340 614 aaPredicted RBP12.83□□□□□ -0.36
PRKD3-209ENST00000477132 LTFP02788 710 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 ATP1A3P13637 1013 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 EIF2DP41214 584 aaKnown RBP12.83□□□□□ -0.36
PRKD3-209ENST00000477132 SEC13P55735 322 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 ANO4Q32M45 955 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 MSANTD2Q6P1R3 559 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 TPGS1Q6ZTW0 290 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 FMNL3Q8IVF7 1028 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 DHX40Q8IX18 779 aaKnown RBP12.83□□□□□ -0.36
PRKD3-209ENST00000477132 SCUBE3Q8IX30 993 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 ZBTB44Q8NCP5 570 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 STK32AQ8WU08 396 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 PLCB1Q9NQ66 1216 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 ABCC13Q9NSE7 274 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 MARK1Q9P0L2 795 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 AGO1Q9UL18 857 aaKnown RBP12.83□□□□□ -0.36
PRKD3-209ENST00000477132 PCDHGC3Q9UN70 934 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 SIK3Q9Y2K2 1263 aa12.83□□□□□ -0.36
PRKD3-209ENST00000477132 MYO18AQ92614 2054 aaKnown RBP12.83□□□□□ -0.36
PRKD3-209ENST00000477132 FAM170AA1A519 330 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 LGALS16A8MUM7 142 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 CHURC1-FNTBB4DL54 471 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 NEDD8-MDP1E9PL57 170 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 F8VZ95 297 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 GFRA3O60609 400 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 TULP3O75386 442 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 FBXO21O94952 628 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 KAT7O95251 611 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 TYRP14679 529 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 COG7P83436 770 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 PTK2Q05397 1052 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 TRIP4Q15650 581 aaPredicted RBP12.82□□□□□ -0.36
PRKD3-209ENST00000477132 KLHL40Q2TBA0 621 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 FBXO43Q4G163 708 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 TMEM110Q86TL2 294 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 DENND1CQ8IV53 801 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 C1orf131Q8NDD1 294 aaKnown RBP12.82□□□□□ -0.36
PRKD3-209ENST00000477132 USP33Q8TEY7 942 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 RNF139Q8WU17 664 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 BHMTQ93088 406 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 NKD2Q969F2 451 aaPredicted RBP12.82□□□□□ -0.36
PRKD3-209ENST00000477132 PLD4Q96BZ4 506 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 CPXM1Q96SM3 734 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 PNKPQ96T60 521 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 BBS2Q9BXC9 721 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 ZDHHC4Q9NPG8 344 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 ARHGEF4Q9NR80 690 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 OLA1Q9NTK5 396 aaKnown RBP12.82□□□□□ -0.36
PRKD3-209ENST00000477132 ZSCAN32Q9NX65 697 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 PLK2Q9NYY3 685 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 STRIP2Q9ULQ0 834 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 NAALADL1Q9UQQ1 740 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 PCDHGA2Q9Y5H1 932 aa12.82□□□□□ -0.36
PRKD3-209ENST00000477132 CACNG3O60359 315 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 IGLV3-27P01718 113 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 ERBB2P04626 1255 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 CYP11B1P15538 503 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 ACADSBP45954 432 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 PXNP49023 591 aaPredicted RBP12.81□□□□□ -0.36
PRKD3-209ENST00000477132 FNTBP49356 437 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 PITX1P78337 314 aaPredicted RBP12.81□□□□□ -0.36
PRKD3-209ENST00000477132 SRSF5Q13243 272 aaKnown RBP12.81□□□□□ -0.36
PRKD3-209ENST00000477132 SYCP1Q15431 976 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 TAF5Q15542 800 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 PTPN20Q4JDL3 420 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 C2orf27AQ580R0 203 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 EMC10Q5UCC4 262 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 FYB2Q5VWT5 728 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 SYPL2Q5VXT5 272 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 HEATR6Q6AI08 1181 aaKnown RBP12.81□□□□□ -0.36
PRKD3-209ENST00000477132 ZC3H14Q6PJT7 736 aaKnown RBP12.81□□□□□ -0.36
PRKD3-209ENST00000477132 TOGARAM2Q6ZUX3 1019 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 NOP9Q86U38 636 aaKnown RBP12.81□□□□□ -0.36
PRKD3-209ENST00000477132 FAM217AQ8IXS0 508 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 DQX1Q8TE96 717 aaKnown RBP12.81□□□□□ -0.36
PRKD3-209ENST00000477132 DDX1Q92499 740 aaKnown RBP12.81□□□□□ -0.36
PRKD3-209ENST00000477132 EXOC4Q96A65 974 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 FAM149B1Q96BN6 582 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 BPIFA3Q9BQP9 254 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 LHX5Q9H2C1 402 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 FAM207AQ9NSI2 230 aaPredicted RBP12.81□□□□□ -0.36
PRKD3-209ENST00000477132 HCN2Q9UL51 889 aa12.81□□□□□ -0.36
PRKD3-209ENST00000477132 HBS1LQ9Y450 684 aaKnown RBP12.81□□□□□ -0.36
PRKD3-209ENST00000477132 A0A0A0MRY4 1105 aa12.8□□□□□ -0.36
PRKD3-209ENST00000477132 SYCE3A1L190 88 aa12.8□□□□□ -0.36
PRKD3-209ENST00000477132 LRRC10BA6NIK2 292 aa12.8□□□□□ -0.36
PRKD3-209ENST00000477132 GFRA2O00451 464 aa12.8□□□□□ -0.36
PRKD3-209ENST00000477132 PENKP01210 267 aaPredicted RBP12.8□□□□□ -0.36
PRKD3-209ENST00000477132 APODP05090 189 aa12.8□□□□□ -0.36
PRKD3-209ENST00000477132 NCAM1P13591 858 aa12.8□□□□□ -0.36
PRKD3-209ENST00000477132 HNRNPLP14866 589 aaKnown RBP eCLIP12.8□□□□□ -0.36
PRKD3-209ENST00000477132 KIR2DL1P43626 348 aaPredicted RBP12.8□□□□□ -0.36
PRKD3-209ENST00000477132 JAM2P57087 298 aa12.8□□□□□ -0.36
PRKD3-209ENST00000477132 POLR2FP61218 127 aaKnown RBP12.8□□□□□ -0.36
PRKD3-209ENST00000477132 FKBP15Q5T1M5 1219 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms