RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 APOL1O14791 398 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 WDR46O15213 610 aaKnown RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 RPS6KA5O75582 802 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 TMEM63AO94886 807 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 AMHP03971 560 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 OATP04181 439 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CALB1P05937 261 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 IL1R2P27930 398 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CCND3P30281 292 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 SULT1E1P49888 294 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 SLC8A3P57103 927 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 MRPS22P82650 360 aaKnown RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 LMNB2Q03252 620 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 GBE1Q04446 702 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 MPP5Q8N3R9 675 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 WDR60Q8WVS4 1066 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CKAP2Q8WWK9 683 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CDKL2Q92772 493 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 MAGEB18Q96M61 343 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 RIT2Q99578 217 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 PNPOQ9NVS9 261 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 SNTG2Q9NY99 539 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 ADGRA2Q96PE1 1338 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 A0A0B4J269 797 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 IGKV6D-41A0A0C4DH26 115 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 RASSF9O75901 435 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 SNHG28P0DPA3 235 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 FDX1P10109 184 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 NR4A1P22736 598 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 CCND1P24385 295 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 NEK3P51956 506 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 PREPLQ4J6C6 727 aaPredicted RBP5.15□□□□□ -1.58
CCDC39-204ENST00000476379 PITRM1Q5JRX3 1037 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 N4BP2L1Q5TBK1 243 aaPredicted RBP5.15□□□□□ -1.58
CCDC39-204ENST00000476379 FAM160B1Q5W0V3 765 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 RIPOR1Q6ZS17 1223 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 TFAP2DQ7Z6R9 452 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 CROCCP2Q86T23 111 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 ARHGAP24Q8N264 748 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 SHKBP1Q8TBC3 707 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 ART4Q93070 314 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF570Q96NI8 536 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 SLITRK1Q96PX8 696 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 TWNKQ96RR1 684 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 SMAD5Q99717 465 aaKnown RBP5.15□□□□□ -1.58
CCDC39-204ENST00000476379 GPR88Q9GZN0 384 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 RNF208Q9H0X6 261 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 KDM4CQ9H3R0 1056 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 CYP39A1Q9NYL5 469 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 AFF4Q9UHB7 1163 aaKnown RBP5.15□□□□□ -1.58
CCDC39-204ENST00000476379 NOCTQ9UK39 431 aaKnown RBP5.15□□□□□ -1.58
CCDC39-204ENST00000476379 ATRNL1Q5VV63 1379 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 TCRBV9S1A1TA0A576 114 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 CXorf49A8MYA2 514 aaPredicted RBP5.15□□□□□ -1.58
CCDC39-204ENST00000476379 DNALI1O14645 258 aaPredicted RBP5.15□□□□□ -1.58
CCDC39-204ENST00000476379 DKC1O60832 514 aaKnown RBP eCLIP5.15□□□□□ -1.58
CCDC39-204ENST00000476379 LCA5LO95447 670 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 STAG3L1P0CL83 205 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 EPHA3P29320 983 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 NOMO3P69849 1222 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 LAMTOR4Q0VGL1 99 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 CAPSQ13938 189 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 CA9Q16790 459 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 KRT80Q6KB66 452 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 SLC39A4Q6P5W5 647 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 RINLQ6ZS11 566 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 TRIM67Q6ZTA4 783 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 IFNL1Q8IU54 200 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 IGDCC3Q8IVU1 814 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 RCOR2Q8IZ40 523 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 CLEC4DQ8WXI8 215 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 TRIM11Q96F44 468 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 GMCL1Q96IK5 515 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 NSL1Q96IY1 281 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 SERAC1Q96JX3 654 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 LRGUKQ96M69 825 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 CYP2S1Q96SQ9 504 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 CAAP1Q9H8G2 361 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 XPNPEP1Q9NQW7 623 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 ASNSD1Q9NWL6 643 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 C2CD2Q9Y426 696 aa5.15□□□□□ -1.58
CCDC39-204ENST00000476379 CFAP73A6NFT4 308 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 M0QYT0 321 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 LIASO43766 372 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 CCDC22O60826 627 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 PQBP1O60828 265 aaKnown RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 KRT38O76015 456 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 UNC5CO95185 931 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 CYP2C9P11712 490 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 HDCP19113 662 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 PEX5P50542 639 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 APLP1P51693 650 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 CACNA2D1P54289 1103 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 VCPP55072 806 aaKnown RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 MADCAM1Q13477 382 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 SLC30A9Q6PML9 568 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 KCNT2Q6UVM3 1135 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 ARMCX2Q7L311 632 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 SUGP1Q8IWZ8 645 aaKnown RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 TP53INP2Q8IXH6 220 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms