RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 SNIP1Q8TAD8 396 aaKnown RBP6.24□□□□□ -1.41
CPSF7-210ENST00000474684 NDRG1Q92597 394 aaKnown RBP6.24□□□□□ -1.41
CPSF7-210ENST00000474684 TAF4BQ92750 862 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 KAT5Q92993 513 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 BHMTQ93088 406 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 ZC3H10Q96K80 434 aaKnown RBP6.24□□□□□ -1.41
CPSF7-210ENST00000474684 CNOT6LQ96LI5 555 aaKnown RBP6.24□□□□□ -1.41
CPSF7-210ENST00000474684 CNTNAP3BQ96NU0 1288 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 PNKPQ96T60 521 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 ACOX2Q99424 681 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 HNRNPABQ99729 332 aaKnown RBP6.24□□□□□ -1.41
CPSF7-210ENST00000474684 EDEM2Q9BV94 578 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 NT5C1AQ9BXI3 368 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 KLF16Q9BXK1 252 aaPredicted RBP6.24□□□□□ -1.41
CPSF7-210ENST00000474684 CNTNAP3Q9BZ76 1288 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 SLC6A17Q9H1V8 727 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 TMEM8AQ9HCN3 771 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 CD248Q9HCU0 757 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.24□□□□□ -1.41
CPSF7-210ENST00000474684 PLK2Q9NYY3 685 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 EHD2Q9NZN4 543 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 MBD1Q9UIS9 605 aaPredicted RBP6.24□□□□□ -1.41
CPSF7-210ENST00000474684 FRMD4BQ9Y2L6 1034 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 ANKRD36A6QL64 1941 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 CHD6Q8TD26 2715 aa6.24□□□□□ -1.41
CPSF7-210ENST00000474684 KNTC1P50748 2209 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 LRRK1Q38SD2 2015 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 TCRBV21S2A2A0A5A6 115 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 E2F8A0AVK6 867 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 BCLAF3A2AJT9 711 aaKnown RBP6.23□□□□□ -1.41
CPSF7-210ENST00000474684 PRRT4C9JH25 899 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 NEDD8-MDP1E9PL57 170 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 SLC9A3R1O14745 358 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-210ENST00000474684 CACNG3O60359 315 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 STC2O76061 302 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 KIF20AO95235 890 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 KLKB1P03952 638 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 APODP05090 189 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 ADRB1P08588 477 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 ZNF806P0C7X5 589 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 RARGP13631 454 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 KRT13P13646 458 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 P4HA1P13674 534 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 PSMC2P35998 433 aaKnown RBP6.23□□□□□ -1.41
CPSF7-210ENST00000474684 EIF2DP41214 584 aaKnown RBP6.23□□□□□ -1.41
CPSF7-210ENST00000474684 P2RY2P41231 377 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 PTGER3P43115 390 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 PPP3CCP48454 512 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 KIF11P52732 1056 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 RAD23BP54727 409 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 CREB5Q02930 508 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 GAD2Q05329 585 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 NR1H3Q13133 447 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 ADAM9Q13443 819 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 GOLGA7BQ2TAP0 167 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 ANO4Q32M45 955 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 EDRF1Q3B7T1 1238 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 KRT39Q6A163 491 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 ISM2Q6H9L7 571 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 KIAA1211LQ6NV74 962 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 TPGS1Q6ZTW0 290 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 PIGZQ86VD9 579 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 DDX42Q86XP3 938 aaKnown RBP eCLIP6.23□□□□□ -1.41
CPSF7-210ENST00000474684 ZNF513Q8N8E2 541 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-210ENST00000474684 C12orf50Q8NA57 414 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-210ENST00000474684 OLIG1Q8TAK6 271 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 HMGB4Q8WW32 186 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 CYFIP2Q96F07 1278 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 ZSWIM1Q9BR11 485 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 IMPG2Q9BZV3 1241 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 SCAND2PQ9GZW5 306 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-210ENST00000474684 NACA2Q9H009 215 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 CYP3A43Q9HB55 503 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 FSCN3Q9NQT6 498 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 SPHK2Q9NRA0 654 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 CISHQ9NSE2 258 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 DNAJC17Q9NVM6 304 aaKnown RBP6.23□□□□□ -1.41
CPSF7-210ENST00000474684 MARK1Q9P0L2 795 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 CALCOCO1Q9P1Z2 691 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 TBC1D14Q9P2M4 693 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 EBF1Q9UH73 591 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 RASAL2Q9UJF2 1139 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 NAGPAQ9UK23 515 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 CLEC4EQ9ULY5 219 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 SCML2Q9UQR0 700 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 PCDHA5Q9Y5H7 936 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 RAD54BQ9Y620 910 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 USP3Q9Y6I4 520 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 WDFY3Q8IZQ1 3526 aa6.23□□□□□ -1.41
CPSF7-210ENST00000474684 ASPMQ8IZT6 3477 aa6.22□□□□□ -1.41
CPSF7-210ENST00000474684 TRPM6Q9BX84 2022 aa6.22□□□□□ -1.41
CPSF7-210ENST00000474684 ANKRD11Q6UB99 2663 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-210ENST00000474684 A0A1W2PQF6 199 aa6.22□□□□□ -1.41
CPSF7-210ENST00000474684 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-210ENST00000474684 TM4SF5O14894 197 aa6.22□□□□□ -1.41
CPSF7-210ENST00000474684 GIPC1O14908 333 aa6.22□□□□□ -1.41
CPSF7-210ENST00000474684 ZBTB24O43167 697 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-210ENST00000474684 HMBSP08397 361 aa6.22□□□□□ -1.41
CPSF7-210ENST00000474684 EPB41P11171 864 aaKnown RBP6.22□□□□□ -1.41
CPSF7-210ENST00000474684 HOXB2P14652 356 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms