RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 ITGA8P53708 1063 aa4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 RPS16P62249 146 aaKnown RBP4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 STK3Q13188 491 aa4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 FHL3Q13643 280 aa4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 KPNB1Q14974 876 aaKnown RBP4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 GRHL2Q6ISB3 625 aa4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 TFAP2DQ7Z6R9 452 aa4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 SKAP1Q86WV1 359 aa4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 TRMT61AQ96FX7 289 aaKnown RBP4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 APIPQ96GX9 242 aa4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 FAM227BQ96M60 508 aa4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 C1orf112Q9NSG2 853 aa4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 ZIM2Q9NZV7 527 aa4.35□□□□□ -1.71
GPCPD1-204ENST00000473797 TRBV5-3A0A0A0MS03 114 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 PRSS44E7EML9 344 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 SPTLC2O15270 562 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 PRPF3O43395 683 aaKnown RBP4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 CA12O43570 354 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 HRGP04196 525 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 TMIGD3P0DMS9 266 aaPredicted RBP4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 T-ENOLP0DO92 83 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 TMEM225BP0DP42 221 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 ZKSCAN1P17029 563 aaPredicted RBP4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 NTSR1P30989 418 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 ALDH7A1P49419 539 aaKnown RBP4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 CACNB3P54284 484 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 SLC12A2P55011 1212 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 WDR5P61964 334 aaKnown RBP4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 ACOX1Q15067 660 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 CLEC9AQ6UXN8 241 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 ZNF793Q6ZN11 406 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 RBM44Q6ZP01 1051 aaKnown RBP4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 MBD3L2Q8NHZ7 208 aaPredicted RBP4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 IPCEF1Q8WWN9 437 aaPredicted RBP4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 MSI2Q96DH6 328 aaKnown RBP4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 NLRP4Q96MN2 994 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 TUBB6Q9BUF5 446 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 RXFP3Q9NSD7 469 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 ZNF112Q9UJU3 913 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 PCDHA12Q9UN75 941 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 EVPLQ92817 2033 aa4.34□□□□□ -1.71
GPCPD1-204ENST00000473797 TRIP12Q14669 1992 aaPredicted RBP4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 C4orf47A7E2U8 309 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 CTIFO43310 598 aaKnown RBP4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 MYF5P13349 255 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 TBXAS1P24557 533 aaPredicted RBP4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 IDUAP35475 653 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 C18orf65Q6ZTR6 163 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 SESTD1Q86VW0 696 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 SDR16C5Q8N3Y7 309 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 SLC44A5Q8NCS7 719 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 SUN3Q8TAQ9 357 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 SLC25A28Q96A46 364 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 PRR11Q96HE9 360 aaPredicted RBP4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 RNF26Q9BY78 433 aaPredicted RBP4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 LRRC27Q9C0I9 530 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 ARL8BQ9NVJ2 186 aa4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 SIRT4Q9Y6E7 314 aaPredicted RBP4.33□□□□□ -1.72
GPCPD1-204ENST00000473797 SPATA31A5Q5VU36 1347 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 SPATA31A7Q8IWB4 1347 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 A0A0G2JK05 382 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 SLC22A23A1A5C7 686 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 ANKRD62A6NC57 917 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 SLC28A2O43868 658 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 ATG13O75143 517 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 WDR47O94967 919 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 DUSP1P28562 367 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 DGKQP52824 942 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 PGGT1BP53609 377 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 KCNJ12Q14500 433 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 KCNAB1Q14722 419 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 POLD3Q15054 466 aaPredicted RBP4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 MINDY4Q4G0A6 757 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 AASDHQ4L235 1098 aaPredicted RBP4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 UNC13DQ70J99 1090 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 LRTOMTQ8WZ04 291 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 ZPBPQ9BS86 351 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 SCNM1Q9BWG6 230 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 SAP30LQ9HAJ7 183 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 PAPOLBQ9NRJ5 636 aaKnown RBP4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 DECR2Q9NUI1 292 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 AGO2Q9UKV8 859 aaKnown RBP4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 HPSEQ9Y251 543 aa4.32□□□□□ -1.72
GPCPD1-204ENST00000473797 A6NNZ2 444 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 F8W810 466 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 PRPF4O43172 522 aaKnown RBP eCLIP4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 CBFA2T3O75081 653 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 NDUFB8O95169 186 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 MT3P25713 68 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 HOXD12P35452 270 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 ZXDBP98169 803 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 FAM102BQ5T8I3 360 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 RNF220Q5VTB9 566 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 RFX8Q6ZV50 586 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 PIGKQ92643 395 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 FAM204AQ9H8W3 233 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 ABHD10Q9NUJ1 306 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 SELENONQ9NZV5 590 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 MSRB1Q9NZV6 116 aa4.31□□□□□ -1.72
GPCPD1-204ENST00000473797 OGDHLQ9ULD0 1010 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms