RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 ZNF513Q8N8E2 541 aaPredicted RBP20.33■□□□□ 0.85
COMMD1-208ENST00000472729 DDI1Q8WTU0 396 aa20.33■□□□□ 0.85
COMMD1-208ENST00000472729 PLK2Q9NYY3 685 aa20.33■□□□□ 0.85
COMMD1-208ENST00000472729 AGO1Q9UL18 857 aaKnown RBP20.33■□□□□ 0.85
COMMD1-208ENST00000472729 USP34Q70CQ2 3546 aa20.33■□□□□ 0.84
COMMD1-208ENST00000472729 CAPN9O14815 690 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 GREM1O60565 184 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 RHOBTB1O94844 696 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 SDHBP21912 280 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 ZNF132P52740 706 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 DAOAP59103 153 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 LMNB2Q03252 620 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 PTK2Q05397 1052 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 E2F5Q15329 346 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 VWA3BQ502W6 1294 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 HSP90AA4PQ58FG1 418 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 EMC10Q5UCC4 262 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 CHPFQ8IZ52 775 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 IL17RCQ8NAC3 791 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 FAM149B1Q96BN6 582 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 TUBGCP2Q9BSJ2 902 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 NDST4Q9H3R1 872 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 SFMBT1Q9UHJ3 866 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 CNTN6Q9UQ52 1028 aa20.32■□□□□ 0.84
COMMD1-208ENST00000472729 ZNF638Q14966 1978 aaKnown RBP20.32■□□□□ 0.84
COMMD1-208ENST00000472729 RIF1Q5UIP0 2472 aaKnown RBP20.31■□□□□ 0.84
COMMD1-208ENST00000472729 FOXD2O60548 495 aaPredicted RBP20.31■□□□□ 0.84
COMMD1-208ENST00000472729 CALCAP01258 141 aa20.31■□□□□ 0.84
COMMD1-208ENST00000472729 LTFP02788 710 aa20.31■□□□□ 0.84
COMMD1-208ENST00000472729 SNX16P57768 344 aa20.31■□□□□ 0.84
COMMD1-208ENST00000472729 SPEM2Q0P670 501 aa20.31■□□□□ 0.84
COMMD1-208ENST00000472729 BYSLQ13895 437 aaKnown RBP20.31■□□□□ 0.84
COMMD1-208ENST00000472729 UNC45BQ8IWX7 931 aa20.31■□□□□ 0.84
COMMD1-208ENST00000472729 FAM160A2Q8N612 972 aaPredicted RBP20.31■□□□□ 0.84
COMMD1-208ENST00000472729 ZNF606Q8WXB4 792 aa20.31■□□□□ 0.84
COMMD1-208ENST00000472729 NOX5Q96PH1 765 aa20.31■□□□□ 0.84
COMMD1-208ENST00000472729 PDCL3Q9H2J4 239 aa20.31■□□□□ 0.84
COMMD1-208ENST00000472729 CEP83Q9Y592 693 aa20.31■□□□□ 0.84
COMMD1-208ENST00000472729 OBSL1O75147 1896 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 GREB1Q4ZG55 1949 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 PRR5-ARHGAP8B1AHC4 643 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 KCNJ18B7U540 433 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 MAP3K13O43283 966 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 LRP3O75074 770 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 KLKB1P03952 638 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 NCAM1P13591 858 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 PON1P27169 355 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 HOXC13P31276 330 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 KRT9P35527 623 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 KIR2DL1P43626 348 aaPredicted RBP20.3■□□□□ 0.84
COMMD1-208ENST00000472729 SLC11A2P49281 568 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 ZNF445P59923 1031 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 ARHGAP8P85298 464 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 ARID5AQ03989 594 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 KCNJ12Q14500 433 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 GJB7Q6PEY0 223 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 IRF2BP1Q8IU81 584 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 SCUBE3Q8IX30 993 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 STK32AQ8WU08 396 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 UCMAQ8WVF2 138 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 LOXL4Q96JB6 756 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 SPACA7Q96KW9 195 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 MED15Q96RN5 788 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 ZSWIM1Q9BR11 485 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 TPSD1Q9BZJ3 242 aa20.3■□□□□ 0.84
COMMD1-208ENST00000472729 DENND4CQ5VZ89 1909 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 TCRBV21S2A2A0A5A6 115 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 SGK1O00141 431 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 EEF1GP26641 437 aaKnown RBP20.29■□□□□ 0.84
COMMD1-208ENST00000472729 NTSR1P30989 418 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 GPD2P43304 727 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 BPIFB4P59827 614 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 MESP2Q0VG99 397 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 TRIP4Q15650 581 aaPredicted RBP20.29■□□□□ 0.84
COMMD1-208ENST00000472729 MEA1Q16626 185 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 MPPE1Q53F39 396 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 NUGGCQ68CJ6 796 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 DENND1BQ6P3S1 775 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 SFTPA1Q8IWL2 248 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 ANKRD20A12PQ8NF67 263 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 HMGB4Q8WW32 186 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 DDX50Q9BQ39 737 aaKnown RBP20.29■□□□□ 0.84
COMMD1-208ENST00000472729 SYNCQ9H7C4 482 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 DNAJC12Q9UKB3 198 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 PATJQ8NI35 1801 aa20.29■□□□□ 0.84
COMMD1-208ENST00000472729 TYW5A2RUC4 315 aaKnown RBP20.28■□□□□ 0.84
COMMD1-208ENST00000472729 MBD3O95983 291 aa20.28■□□□□ 0.84
COMMD1-208ENST00000472729 HOXB2P14652 356 aa20.28■□□□□ 0.84
COMMD1-208ENST00000472729 SMYD5Q6GMV2 418 aa20.28■□□□□ 0.84
COMMD1-208ENST00000472729 KBTBD6Q86V97 674 aa20.28■□□□□ 0.84
COMMD1-208ENST00000472729 CCDC117Q8IWD4 279 aaPredicted RBP20.28■□□□□ 0.84
COMMD1-208ENST00000472729 PHTF2Q8N3S3 785 aa20.28■□□□□ 0.84
COMMD1-208ENST00000472729 CPXM2Q8N436 756 aa20.28■□□□□ 0.84
COMMD1-208ENST00000472729 TMA16Q96EY4 203 aaKnown RBP20.28■□□□□ 0.84
COMMD1-208ENST00000472729 ZDHHC4Q9NPG8 344 aa20.28■□□□□ 0.84
COMMD1-208ENST00000472729 STARD13Q9Y3M8 1113 aa20.28■□□□□ 0.84
COMMD1-208ENST00000472729 NFE2L3Q9Y4A8 694 aa20.28■□□□□ 0.84
COMMD1-208ENST00000472729 DMDP11532 3685 aa20.28■□□□□ 0.84
COMMD1-208ENST00000472729 TRIM24O15164 1050 aa20.27■□□□□ 0.84
COMMD1-208ENST00000472729 MSI1O43347 362 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms