RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ARL6IP6Q8N6S5 226 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 LINC01465Q8N7H1 131 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 GIMAP8Q8ND71 665 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-205ENST00000472034 TSTD1Q8NFU3 115 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 KNL1Q8NG31 2342 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 OLIG1Q8TAK6 271 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 CPLX3Q8WVH0 158 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 MAML1Q92585 1016 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 FGF11Q92914 225 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 TMEM176AQ96HP8 235 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 CDHR1Q96JP9 859 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 HRASLS5Q96KN8 279 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 SCLT1Q96NL6 688 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 CEP89Q96ST8 783 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 GAD1Q99259 594 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 LGMNQ99538 433 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 TRIM7Q9C029 511 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 RMI1Q9H9A7 625 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 RSAD1Q9HA92 442 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 TRPV4Q9HBA0 871 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 CPSF2Q9P2I0 782 aaKnown RBP4.76□□□□□ -1.65
LMNB1-205ENST00000472034 SLC9A2Q9UBY0 812 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 SLC5A6Q9Y289 635 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 MYLKQ15746 1914 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 CEP192Q8TEP8 1941 aa4.76□□□□□ -1.65
LMNB1-205ENST00000472034 DDX39AO00148 427 aaKnown RBP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 RNF113AO15541 343 aaKnown RBP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 ZNF623O75123 536 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 MTRF1O75570 445 aaKnown RBP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 CDKL5O76039 1030 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 CBX7O95931 251 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 IFIT2P09913 472 aaKnown RBP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 RNF224P0DH78 156 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 MYL4P12829 197 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 PTPN2P17706 415 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 ITGB6P18564 788 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 GNAT2P19087 354 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 MCM5P33992 734 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 MLH1P40692 756 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 CCNFP41002 786 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 CASP2P42575 452 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 CLCN7P51798 805 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 OXCT1P55809 520 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 TMPRSS3P57727 454 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 CCDC15Q0P6D6 951 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 GRSF1Q12849 480 aaKnown RBP eCLIP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 GRIK2Q13002 908 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 ITGB3BPQ13352 177 aaPredicted RBP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 MSMPQ1L6U9 139 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 MAP9Q49MG5 647 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 ARSHQ5FYA8 562 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 ZNF484Q5JVG2 852 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 UBXN11Q5T124 520 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 FAM171A1Q5VUB5 890 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 TSHZ3Q63HK5 1081 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 TRIM68Q6AZZ1 485 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 CCDC70Q6NSX1 233 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 ZSCAN25Q6NSZ9 544 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 EFCAB12Q6NXP0 572 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 USP49Q70CQ1 688 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 PDZD4Q76G19 769 aaPredicted RBP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 C11orf74Q86VG3 221 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 RASSF3Q86WH2 238 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 SPATS2Q86XZ4 545 aaKnown RBP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 MYO1HQ8N1T3 1032 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 MFSD4AQ8N468 514 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 PDCL2Q8N4E4 241 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 CCDC33Q8N5R6 958 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 DRAXINQ8NBI3 349 aaPredicted RBP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 ASB11Q8WXH4 323 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 HEXIM2Q96MH2 286 aaKnown RBP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 MAP3K14Q99558 947 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 NACAP1Q9BZK3 213 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.75□□□□□ -1.656e-9■■■□□ 15.9
LMNB1-205ENST00000472034 SLITRK6Q9H5Y7 841 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 HPS4Q9NQG7 708 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 PCSK1NQ9UHG2 260 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 XPO7Q9UIA9 1087 aaKnown RBP4.75□□□□□ -1.65
LMNB1-205ENST00000472034 ADAM28Q9UKQ2 775 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 VAV3Q9UKW4 847 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 BLOC1S6Q9UL45 172 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 EFR3BQ9Y2G0 817 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 HES2Q9Y543 173 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 SLC30A1Q9Y6M5 507 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 MED13Q9UHV7 2174 aa4.75□□□□□ -1.65
LMNB1-205ENST00000472034 A0A087WZ62 844 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 IGKV6D-21A0A0A0MT36 114 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 ANO9A1A5B4 782 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 A1L4Q6 167 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 ARL5CA6NH57 179 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 E9PAM4 449 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 CBX4O00257 560 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 TRDMT1O14717 391 aaKnown RBP4.74□□□□□ -1.65
LMNB1-205ENST00000472034 RGS13O14921 159 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 SEC24AO95486 1093 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 PRAMEF12O95522 483 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 PRNPP04156 253 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 FGRP09769 529 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 TRIM27P14373 513 aa4.74□□□□□ -1.65
LMNB1-205ENST00000472034 TNNT3P45378 269 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms