RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 BIN1O00499 593 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 GREM1O60565 184 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 TBX18O95935 607 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 IRF1P10914 325 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 RARGP13631 454 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 SLC6A11P48066 632 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 ATXN1P54253 815 aaKnown RBP13.12□□□□□ -0.31
CCNL1-213ENST00000471044 MRPS21P82921 87 aaKnown RBP13.12□□□□□ -0.31
CCNL1-213ENST00000471044 DMC1Q14565 340 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 RAB41Q5JT25 222 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 C12orf40Q86WS4 652 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 BBS7Q8IWZ6 715 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 TRIML1Q8N9V2 468 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 ANKRD52Q8NB46 1076 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 BAP1Q92560 729 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 SPHK2Q9NRA0 654 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 POLR3BQ9NW08 1133 aaPredicted RBP13.12□□□□□ -0.31
CCNL1-213ENST00000471044 CLIC5Q9NZA1 410 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 CHMP5Q9NZZ3 219 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 ZFHX4Q86UP3 3567 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.11□□□□□ -0.31
CCNL1-213ENST00000471044 P4HA2O15460 535 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 HOXC11O43248 304 aaPredicted RBP13.11□□□□□ -0.31
CCNL1-213ENST00000471044 GNA14O95837 355 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 APODP05090 189 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 RETP07949 1114 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 RALAP11233 206 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 TGM1P22735 817 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 PLA2G4AP47712 749 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 PXNP49023 591 aaPredicted RBP13.11□□□□□ -0.31
CCNL1-213ENST00000471044 MARSP56192 900 aaKnown RBP13.11□□□□□ -0.31
CCNL1-213ENST00000471044 UBE2HP62256 183 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 GOLGA8FQ08AF8 430 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 GOLGA8DPQ0D2H9 430 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 LRMPQ12912 555 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 PAK1Q13153 545 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 LPAL2Q16609 132 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 ST3GAL2Q16842 350 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 SGO2Q562F6 1265 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 LYPD8Q6UX82 237 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 TADA2BQ86TJ2 420 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 PIGZQ86VD9 579 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 ETFBKMTQ8IXQ9 262 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 PHTF2Q8N3S3 785 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 LMO3Q8TAP4 145 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 GAB3Q8WWW8 586 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 HHIPQ96QV1 700 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 CDK5RAP1Q96SZ6 601 aaKnown RBP13.11□□□□□ -0.31
CCNL1-213ENST00000471044 EBF1Q9UH73 591 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 DNMT3LQ9UJW3 386 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 NAGPAQ9UK23 515 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 LSM7Q9UK45 103 aaKnown RBP13.11□□□□□ -0.31
CCNL1-213ENST00000471044 TSPAN16Q9UKR8 245 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 CDV3Q9UKY7 258 aaKnown RBP13.11□□□□□ -0.31
CCNL1-213ENST00000471044 FAM208BQ5VWN6 2430 aa13.11□□□□□ -0.31
CCNL1-213ENST00000471044 CEP295Q9C0D2 2601 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 XPO1O14980 1071 aaKnown RBP13.1□□□□□ -0.31
CCNL1-213ENST00000471044 MDM4O15151 490 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 LRP3O75074 770 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 KAT7O95251 611 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 APBB3O95704 486 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 VDRP11473 427 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 GRIA2P42262 883 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 TNFRSF4P43489 277 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 BCAT1P54687 386 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 SEC13P55735 322 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 STX17P56962 302 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 SLC8A3P57103 927 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 PDE4CQ08493 712 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 MESP2Q0VG99 397 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 CETN1Q12798 172 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 GOLGA7BQ2TAP0 167 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 HSF5Q4G112 596 aaPredicted RBP13.1□□□□□ -0.31
CCNL1-213ENST00000471044 PREPLQ4J6C6 727 aaPredicted RBP13.1□□□□□ -0.31
CCNL1-213ENST00000471044 C10orf120Q5SQS8 335 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 BTBD8Q5XKL5 378 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 CEP68Q76N32 757 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.1□□□□□ -0.31
CCNL1-213ENST00000471044 TMEM25Q86YD3 366 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 TRIM59Q8IWR1 403 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 NT5C1BQ96P26 610 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 SRRTQ9BXP5 876 aaKnown RBP13.1□□□□□ -0.31
CCNL1-213ENST00000471044 PARD6AQ9NPB6 346 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 ATP13A2Q9NQ11 1180 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 ARHGEF4Q9NR80 690 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 NUDT5Q9UKK9 219 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 KIAA1257Q9ULG3 409 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 MMP17Q9ULZ9 603 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 SDK1Q7Z5N4 2213 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 ABCA7Q8IZY2 2146 aa13.1□□□□□ -0.31
CCNL1-213ENST00000471044 DCDC2BA2VCK2 349 aa13.09□□□□□ -0.31
CCNL1-213ENST00000471044 ANTXRLA6NF34 631 aa13.09□□□□□ -0.31
CCNL1-213ENST00000471044 RPP40O75818 363 aaKnown RBP13.09□□□□□ -0.31
CCNL1-213ENST00000471044 PAEPP09466 180 aa13.09□□□□□ -0.31
CCNL1-213ENST00000471044 CCDC192P0DO97 292 aa13.09□□□□□ -0.31
CCNL1-213ENST00000471044 SDHBP21912 280 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms