RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 NPHS2Q9NP85 383 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 MRGBPQ9NV56 204 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 KBTBD4Q9NVX7 518 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 MCM9Q9NXL9 1143 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 TAS2R1Q9NYW7 299 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 VPS54Q9P1Q0 977 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 RGS17Q9UGC6 210 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 SLC24A2Q9UI40 661 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 DBNLQ9UJU6 430 aaKnown RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 APPL1Q9UKG1 709 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 PCDHB6Q9Y5E3 794 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 PTPRUQ92729 1446 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 FER1L4A9Z1Z3 1794 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 ZMYM2Q9UBW7 1377 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 NALCNQ8IZF0 1738 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 NCANO14594 1321 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SF3B1O75533 1304 aaKnown RBP eCLIP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TNKSO95271 1327 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ATAD5Q96QE3 1844 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 A0A087WXM4 84 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SMIM23A6NLE4 172 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TRIM64CA6NLI5 447 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 B8ZZF3 427 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 BOLA2-SMG1P6H3BVE0 249 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ATP2A1O14983 1001 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CYP26A1O43174 497 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 KCNQ2O43526 872 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 XPOTO43592 962 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 BUD23O43709 281 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 FAM189A1O60320 539 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CCNT2O60583 730 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 GUCY1B2O75343 617 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CIAO1O76071 339 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TOMM70O94826 608 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 KLHL2O95198 593 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 BPNT1O95861 308 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SCGB1D2O95969 90 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CHEK2O96017 543 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 FGGP02679 453 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CD48P09326 243 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ZBTB48P10074 688 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 MYBL1P10243 752 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 KRT3P12035 628 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 MYCLP1P12525 358 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ALAS1P13196 640 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ETS2P15036 469 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TSHRP16473 764 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 PDE6AP16499 860 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 KRT15P19012 456 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 POU3F3P20264 500 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 JAK1P23458 1154 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 IL32P24001 234 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CTNNA2P26232 953 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 NUDT1P36639 197 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ALDH3B2P48448 385 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 HSD17B4P51659 736 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 BLVRAP53004 296 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 NCKAP1LP55160 1127 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 STX1BP61266 288 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 FKBP3Q00688 224 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 FOLH1Q04609 750 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 OCA2Q04671 838 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 GFPT1Q06210 699 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 LRRC41Q15345 812 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 DLGAP5Q15398 846 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 MAPK6Q16659 721 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 DGKDQ16760 1214 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CLEC16AQ2KHT3 1053 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TRIM16LQ309B1 348 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ZBED5Q49AG3 693 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 NADK2Q4G0N4 442 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TMEM67Q5HYA8 995 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 EFHC1Q5JVL4 640 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 FAM83BQ5T0W9 1011 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 OGFRL1Q5TC84 451 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SEL1L2Q5TEA6 688 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 C11orf63Q6NUN7 778 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 ZDHHC24Q6UX98 284 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 DSTYKQ6XUX3 929 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 LPCAT2Q7L5N7 544 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 NT5DC3Q86UY8 548 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TTC30AQ86WT1 665 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CHSY1Q86X52 802 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 LURAP1LQ8IV03 231 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 GRAMD1CQ8IYS0 662 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 RTKN2Q8IZC4 609 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SLC7A5P1Q8MH63 180 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 MYO1HQ8N1T3 1032 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 CENPSQ8N2Z9 138 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 LZTR1Q8N653 840 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 TRIML2Q8N7C3 387 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 PDZD8Q8NEN9 1154 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 LILRB4Q8NHJ6 448 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 SLC30A5Q8TAD4 765 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 FBXO25Q8TCJ0 367 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 PNPT1Q8TCS8 783 aaKnown RBP5.03□□□□□ -1.6
SF3B1-207ENST00000468925 IGDCC4Q8TDY8 1250 aa5.03□□□□□ -1.6
SF3B1-207ENST00000468925 DENND1AQ8TEH3 1009 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms