RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 C7orf25Q9BPX7 421 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 PCED1AQ9H1Q7 454 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 PRDM16Q9HAZ2 1276 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 OSGEPQ9NPF4 335 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 TLR8Q9NR97 1041 aaKnown RBP12.86□□□□□ -0.35
UBR4-211ENST00000467272 DMAC2Q9NW81 257 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 PCDHB9Q9Y5E1 797 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 LRRIQ3A6PVS8 624 aaPredicted RBP12.85□□□□□ -0.35
UBR4-211ENST00000467272 CLIC2O15247 247 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 BCAT2O15382 392 aaPredicted RBP12.85□□□□□ -0.35
UBR4-211ENST00000467272 CYP26A1O43174 497 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 NDUFS2O75306 463 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 STC2O76061 302 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 CCDC130P13994 396 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 ASPAP45381 313 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 CYP2J2P51589 502 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 AP3M2P53677 418 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 TRPC3Q13507 836 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 SMAD1Q15797 465 aaKnown RBP12.85□□□□□ -0.35
UBR4-211ENST00000467272 GEN1Q17RS7 908 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 FAM26FQ5R3K3 315 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 DCAF12L1Q5VU92 463 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 TMEM215Q68D42 235 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 IL27RAQ6UWB1 636 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 CLEC20AQ6ZU45 233 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 UNC93AQ86WB7 457 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 SCUBE3Q8IX30 993 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 FAM217AQ8IXS0 508 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 RGL4Q8IZJ4 473 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 C12orf29Q8N999 325 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 ELMO3Q96BJ8 720 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 HNRNPABQ99729 332 aaKnown RBP12.85□□□□□ -0.35
UBR4-211ENST00000467272 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 GPR174Q9BXC1 333 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 CUEDC2Q9H467 287 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 GAREM1Q9H706 876 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 PNPLA8Q9NP80 782 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 TM7SF3Q9NS93 570 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 CGNQ9P2M7 1197 aaKnown RBP12.85□□□□□ -0.35
UBR4-211ENST00000467272 CLEC4EQ9ULY5 219 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 USP3Q9Y6I4 520 aa12.85□□□□□ -0.35
UBR4-211ENST00000467272 CABIN1Q9Y6J0 2220 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 FLRT2O43155 660 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 ZBTB24O43167 697 aaPredicted RBP12.84□□□□□ -0.35
UBR4-211ENST00000467272 PAPSS1O43252 624 aaPredicted RBP12.84□□□□□ -0.35
UBR4-211ENST00000467272 CER1O95813 267 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 SYT1P21579 422 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 OXTRP30559 389 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 PLA2G4AP47712 749 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 KIF11P52732 1056 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 MAP3K7CLP57077 242 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 MCCD1P59942 119 aaPredicted RBP12.84□□□□□ -0.35
UBR4-211ENST00000467272 INCA1Q0VD86 236 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 NCOA4Q13772 614 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 ZNF699Q32M78 642 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 ZACNQ401N2 412 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 ZNF667Q5HYK9 610 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 C1orf220Q5T0J3 134 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 KIAA1324Q6UXG2 1013 aaKnown RBP12.84□□□□□ -0.35
UBR4-211ENST00000467272 CCDC186Q7Z3E2 898 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 MARCH9Q86YJ5 346 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 TMPRSS6Q8IU80 811 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 PDILTQ8N807 584 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 LINC00301Q8NCQ3 95 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 HNRNPLLQ8WVV9 542 aaKnown RBP12.84□□□□□ -0.35
UBR4-211ENST00000467272 TWNKQ96RR1 684 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 CDC6Q99741 560 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 MED10Q9BTT4 135 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 LRRC27Q9C0I9 530 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.84□□□□□ -0.359e-6■■□□□ 13.5
UBR4-211ENST00000467272 PLK2Q9NYY3 685 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 CLIC5Q9NZA1 410 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 DNMT3LQ9UJW3 386 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 BTBD3Q9Y2F9 522 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 PCDHA5Q9Y5H7 936 aa12.84□□□□□ -0.35
UBR4-211ENST00000467272 A0A1W2PQH9 124 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 VPS37CA5D8V6 355 aaPredicted RBP12.83□□□□□ -0.36
UBR4-211ENST00000467272 TRABD2BA6NFA1 517 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 MDM4O15151 490 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 PCDHGA12O60330 932 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 ASS1P00966 412 aaKnown RBP12.83□□□□□ -0.36
UBR4-211ENST00000467272 RARGP13631 454 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 PDCP20941 246 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 MATKP42679 507 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 NDST1P52848 882 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 CEBPZQ03701 1054 aaKnown RBP12.83□□□□□ -0.36
UBR4-211ENST00000467272 ORC1Q13415 861 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 UNC13DQ70J99 1090 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 SLC9A9Q8IVB4 645 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 NUP58Q9BVL2 599 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 NACA2Q9H009 215 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 EIF2B4Q9UI10 523 aaKnown RBP12.83□□□□□ -0.36
UBR4-211ENST00000467272 LSM7Q9UK45 103 aaKnown RBP12.83□□□□□ -0.36
UBR4-211ENST00000467272 MTMR6Q9Y217 621 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 CKAP5Q14008 2032 aa12.83□□□□□ -0.36
UBR4-211ENST00000467272 MEI4A8MW99 385 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 RPN1P04843 607 aaKnown RBP12.82□□□□□ -0.36
UBR4-211ENST00000467272 NEFLP07196 543 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 PRKCHP24723 683 aa12.82□□□□□ -0.36
UBR4-211ENST00000467272 DLG4P78352 724 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms