RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 BAZ2BQ9UIF8 2168 aaKnown RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 PRSS38A1L453 326 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 GRM6O15303 877 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 PRPF3O43395 683 aaKnown RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 TBX10O75333 385 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ARIH2O95376 493 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ICAM1P05362 532 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 CLEC2LP0C7M8 214 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 TXNP10599 105 aaKnown RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 POU3F2P20265 443 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 SYT1P21579 422 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ICAM3P32942 547 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ID4P47928 161 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 MCM2P49736 904 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 SCNN1BP51168 640 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 STAT2P52630 851 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 RCAN1P53805 252 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 NPEPPSP55786 919 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 COASYQ13057 564 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 PPP2R5BQ15173 497 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 CDC37Q16543 378 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ASPRV1Q53RT3 343 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 C1QL3Q5VWW1 255 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 KIF18BQ86Y91 864 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 PASD1Q8IV76 773 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 TMTC2Q8N394 836 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 SMRP1Q8NCR6 262 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 CTCFLQ8NI51 663 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF483Q8TF39 744 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 AFG1LQ8WV93 481 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 MAP3K14Q99558 947 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 MNTQ99583 582 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 FDXACB1Q9BRP7 624 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 SPZ1Q9BXG8 430 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 RANBP17Q9H2T7 1088 aaKnown RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 SLITRK6Q9H5Y7 841 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 HDAC6Q9UBN7 1215 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 STK36Q9NRP7 1315 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 GVINP1Q7Z2Y8 2422 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 OVOL3O00110 214 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 ALDH1A2O94788 518 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 FSBPO95073 299 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 ADH4P08319 380 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 CASRP41180 1078 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 IL2P60568 153 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 ARHGAP1Q07960 439 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 RESTQ13127 1097 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 SPIDRQ14159 915 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 LRRC32Q14392 662 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 CLUL1Q15846 466 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 UBE2SQ16763 222 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 PFKFB3Q16875 520 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-204ENST00000463622 USH1GQ495M9 461 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 CCDC178Q5BJE1 867 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 SYNE3Q6ZMZ3 975 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 ESPNLQ6ZVH7 1005 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 SERINC5Q86VE9 423 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 MYOCDQ8IZQ8 938 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 LEO1Q8WVC0 666 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-204ENST00000463622 SUSD6Q92537 303 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 RIPOR3Q96MK2 946 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 PHF7Q9BWX1 381 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-204ENST00000463622 RNF26Q9BY78 433 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-204ENST00000463622 MAF1Q9H063 256 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 EPC1Q9H2F5 836 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 RBM28Q9NW13 759 aaKnown RBP4.06□□□□□ -1.76
SCFD1-204ENST00000463622 AURKAIP1Q9NWT8 199 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-204ENST00000463622 COL20A1Q9P218 1284 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 SMC3Q9UQE7 1217 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 PCDHB6Q9Y5E3 794 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 EMSYQ7Z589 1322 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 COL11A1P12107 1806 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-204ENST00000463622 EPG5Q9HCE0 2579 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 VPS13AQ96RL7 3174 aa4.06□□□□□ -1.76
SCFD1-204ENST00000463622 RSPH10B2B2RC85 870 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 BTBD18B2RXH4 712 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 CPLX1O14810 134 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 LINC01565O15544 149 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 DHX16O60231 1041 aaKnown RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 MFAP3LO75121 409 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 PPFIA4O75335 1185 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 FKBP9O95302 570 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 LY86O95711 162 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 MMP3P08254 477 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 LCTP09848 1927 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 RSPH10BP0C881 870 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 CALM1P0DP23 149 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 CALM2P0DP24 149 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 CALM3P0DP25 149 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 SCG2P13521 617 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 ATF7P17544 494 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 HOXC8P31273 242 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 NT5C2P49902 561 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 RPS6P62753 249 aaKnown RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 CACNA1BQ00975 2339 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 IKQ13123 557 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 MYO7AQ13402 2215 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 BECN1Q14457 450 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 SLC30A10Q6XR72 485 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 FKBP9P1Q75LS8 142 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms