RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 TTC22Q5TAA0 569 aa14.19□□□□□ -0.14
C9orf3-211ENST00000463372 RNF20Q5VTR2 975 aa14.19□□□□□ -0.14
C9orf3-211ENST00000463372 TPGS1Q6ZTW0 290 aa14.19□□□□□ -0.14
C9orf3-211ENST00000463372 PIK3AP1Q6ZUJ8 805 aa14.19□□□□□ -0.14
C9orf3-211ENST00000463372 MAMDC2Q7Z304 686 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-211ENST00000463372 TMC6Q7Z403 805 aa14.19□□□□□ -0.14
C9orf3-211ENST00000463372 OR2T3Q8NH03 318 aa14.19□□□□□ -0.14
C9orf3-211ENST00000463372 POM121Q96HA1 1249 aa14.19□□□□□ -0.14
C9orf3-211ENST00000463372 CEP295NLQ96MC4 621 aa14.19□□□□□ -0.14
C9orf3-211ENST00000463372 DUSP9Q99956 384 aaKnown RBP14.19□□□□□ -0.14
C9orf3-211ENST00000463372 DDX43Q9NXZ2 648 aaKnown RBP14.19□□□□□ -0.14
C9orf3-211ENST00000463372 PCDHGA4Q9Y5G9 962 aa14.19□□□□□ -0.14
C9orf3-211ENST00000463372 APCP25054 2843 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 FAM47DPA6NHR8 397 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 KPNA7A9QM74 516 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 TLR4O00206 839 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 MED24O75448 989 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 ITGA2BP08514 1039 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 CISD3P0C7P0 127 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 ACO1P21399 889 aaKnown RBP14.18□□□□□ -0.14
C9orf3-211ENST00000463372 NXPH1P58417 271 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 CYP4F2P78329 520 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 SRSF6Q13247 344 aaKnown RBP14.18□□□□□ -0.14
C9orf3-211ENST00000463372 TMEM132DQ14C87 1099 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 ENOX2Q16206 610 aaKnown RBP14.18□□□□□ -0.14
C9orf3-211ENST00000463372 SV2CQ496J9 727 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 C14orf80Q86SX3 495 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 CD302Q8IX05 232 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 FAM177A1Q8N128 213 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-211ENST00000463372 WDR36Q8NI36 951 aaKnown RBP14.18□□□□□ -0.14
C9orf3-211ENST00000463372 MAPK15Q8TD08 544 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 SLITRK1Q96PX8 696 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 FUCA2Q9BTY2 467 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 TTLL2Q9BWV7 592 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 LSG1Q9H089 658 aaKnown RBP14.18□□□□□ -0.14
C9orf3-211ENST00000463372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.18□□□□□ -0.144e-8■■■■■ 298.1
C9orf3-211ENST00000463372 SEPT10Q9P0V9 454 aa14.18□□□□□ -0.14
C9orf3-211ENST00000463372 LZTS3O60299 673 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-211ENST00000463372 SDC3O75056 442 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 RTN2O75298 545 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 DNTTP04053 509 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 IRF1P10914 325 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 CKMT1AP12532 417 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 SSRP1Q08945 709 aaKnown RBP14.17□□□□□ -0.14
C9orf3-211ENST00000463372 TAF10Q12962 218 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 ZNF234Q14588 700 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 TGIF1Q15583 401 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 TTC31Q49AM3 519 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-211ENST00000463372 MANEAQ5SRI9 462 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 C1QL3Q5VWW1 255 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 VSTM1Q6UX27 236 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 ZPBP2Q6X784 338 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 C4orf50Q6ZRC1 276 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 EVA1BQ9NVM1 165 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 CUEDC1Q9NWM3 386 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-211ENST00000463372 MARK1Q9P0L2 795 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 MAGEC2Q9UBF1 373 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-211ENST00000463372 DKK3Q9UBP4 350 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 TUBD1Q9UJT1 453 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 ENTPD2Q9Y5L3 495 aa14.17□□□□□ -0.14
C9orf3-211ENST00000463372 COL27A1Q8IZC6 1860 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-211ENST00000463372 RP1P56715 2156 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 SLC16A4O15374 487 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 MTSS1O43312 755 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 COCHO43405 550 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 NOBOXO60393 691 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 DEXIO95424 95 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 PRKCHP24723 683 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 TDRD10Q5VZ19 366 aaKnown RBP14.16□□□□□ -0.14
C9orf3-211ENST00000463372 BORAQ6PGQ7 559 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 SERPINA13PQ6UXR4 307 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 CCDC83Q8IWF9 413 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 PDCL2Q8N4E4 241 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 BHMTQ93088 406 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 PKMYT1Q99640 499 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 KCNJ14Q9UNX9 436 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 HIVEP3Q5T1R4 2406 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 DNHD1Q96M86 4753 aa14.16□□□□□ -0.14
C9orf3-211ENST00000463372 A0A1W2PR77 199 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 PMS2P1A4D2B8 440 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 VPS4BO75351 444 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 CENPBP07199 599 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-211ENST00000463372 POLE2P56282 527 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 NOP14P78316 857 aaKnown RBP14.15□□□□□ -0.14
C9orf3-211ENST00000463372 ARID5AQ03989 594 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 ZBTB16Q05516 673 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 CCDC142Q17RM4 750 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 OR4C6Q8NH72 309 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 BRF1Q92994 677 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 BICD1Q96G01 975 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 HAPLN2Q9GZV7 340 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 NACA2Q9H009 215 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 BHMT2Q9H2M3 363 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 DPP3Q9NY33 737 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 VPS4AQ9UN37 437 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 NCKAP1Q9Y2A7 1128 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 DERAQ9Y315 318 aa14.15□□□□□ -0.14
C9orf3-211ENST00000463372 HUS1O60921 280 aa14.14□□□□□ -0.15
C9orf3-211ENST00000463372 DDAH2O95865 285 aa14.14□□□□□ -0.15
C9orf3-211ENST00000463372 ADRB2P07550 413 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms