RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 PCDHA3Q9Y5H8 950 aa10.85□□□□□ -0.67
SCNM1-204ENST00000461862 V9GYY5 206 aaPredicted RBP10.85□□□□□ -0.67
SCNM1-204ENST00000461862 SCN5AQ14524 2016 aa10.85□□□□□ -0.67
SCNM1-204ENST00000461862 TARSL2A2RTX5 802 aaKnown RBP10.84□□□□□ -0.67
SCNM1-204ENST00000461862 CCDC188H7C350 402 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 CYB561D2O14569 222 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 PSTPIP1O43586 416 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 CEP104O60308 925 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 GPD2P43304 727 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 LHX1P48742 406 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 DNA2P51530 1060 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 BCAT1P54687 386 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 ORC1Q13415 861 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 PPP2R5EQ16537 467 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 UPP1Q16831 310 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 GLE1Q53GS7 698 aaKnown RBP10.84□□□□□ -0.67
SCNM1-204ENST00000461862 PLEKHG4Q58EX7 1191 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 FAM109BQ6ICB4 259 aaPredicted RBP10.84□□□□□ -0.67
SCNM1-204ENST00000461862 ACOT1Q86TX2 421 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 PDCL2Q8N4E4 241 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 NIPA2Q8N8Q9 360 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 NOA1Q8NC60 698 aaKnown RBP10.84□□□□□ -0.67
SCNM1-204ENST00000461862 RNF169Q8NCN4 708 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 FNIP1Q8TF40 1166 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 LINC01599Q8WXQ3 324 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 SEPT8Q92599 483 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 SENP8Q96LD8 212 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 TOX2Q96NM4 488 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 TCF12Q99081 682 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 GDF15Q99988 308 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 NRSN2Q9GZP1 204 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 SYNCQ9H7C4 482 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 RNF19AQ9NV58 838 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 TMEM161AQ9NX61 479 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 MIOSQ9NXC5 875 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 DSEQ9UL01 958 aa10.84□□□□□ -0.67
SCNM1-204ENST00000461862 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCNM1-204ENST00000461862 FAM170AA1A519 330 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 TMEM191CA6NGB0 347 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 SIGLEC16A6NMB1 481 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 KIAA1324LA8MWY0 1029 aaPredicted RBP10.83□□□□□ -0.68
SCNM1-204ENST00000461862 DCDC2CA8MYV0 355 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 TMEM189-UBE2V1I3L0A0 370 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 GABRDO14764 452 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 TIAF1O95411 115 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 FGFR1P11362 822 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 ODC1P11926 461 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 H2AFXP16104 143 aaPredicted RBP10.83□□□□□ -0.68
SCNM1-204ENST00000461862 PEX5P50542 639 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 CLCNKBP51801 687 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 RWDD2BP57060 319 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 PSMC1P62191 440 aaKnown RBP10.83□□□□□ -0.68
SCNM1-204ENST00000461862 C2orf54Q08AI8 447 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 BST2Q10589 180 aaKnown RBP10.83□□□□□ -0.68
SCNM1-204ENST00000461862 PIGHQ14442 188 aaPredicted RBP10.83□□□□□ -0.68
SCNM1-204ENST00000461862 SEL1L2Q5TEA6 688 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 DCUN1D2Q6PH85 259 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 DSTYKQ6XUX3 929 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 BEND4Q6ZU67 534 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 TMCO2Q7Z6W1 182 aaPredicted RBP10.83□□□□□ -0.68
SCNM1-204ENST00000461862 DEFB128Q7Z7B8 93 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 XYLT1Q86Y38 959 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 ZDHHC17Q8IUH5 632 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 CCNJLQ8IV13 435 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 ANKRD52Q8NB46 1076 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 B3GALNT2Q8NCR0 500 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 MCRS1Q96EZ8 462 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 MS4A14Q96JA4 679 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 RNPC3Q96LT9 517 aaKnown RBP10.83□□□□□ -0.68
SCNM1-204ENST00000461862 CPXM1Q96SM3 734 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 HIPK3Q9H422 1215 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 CHORDC1Q9UHD1 332 aaPredicted RBP10.83□□□□□ -0.68
SCNM1-204ENST00000461862 CYTH4Q9UIA0 394 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 TMEM59LQ9UK28 342 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 HIF3AQ9Y2N7 669 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 NME7Q9Y5B8 376 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 NR2E3Q9Y5X4 410 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 MICAL3Q7RTP6 2002 aa10.83□□□□□ -0.68
SCNM1-204ENST00000461862 TET1Q8NFU7 2136 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 GOLGA6L10A0A0M3HER8 536 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 CASTOR2A6NHX0 329 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 PRR19A6NJB7 356 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 NBNO60934 754 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 TIMP1P01033 207 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 CXCL10P02778 98 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 ERBB2P04626 1255 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 CYP11A1P05108 521 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 KRT3P12035 628 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 RAG1P15918 1043 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 PCSK1P29120 753 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 ACADSBP45954 432 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 GRIA4P48058 902 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 ACAP1Q15027 740 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 BRD3Q15059 726 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 SHHQ15465 462 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 PTPROQ16827 1216 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 C2CD6Q53TS8 623 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 NOMO2Q5JPE7 1267 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 CYP4A22Q5TCH4 519 aa10.82□□□□□ -0.68
SCNM1-204ENST00000461862 LRRC38Q5VT99 294 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms