RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CEP68Q76N32 757 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 FMNL3Q8IVF7 1028 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 CCDC33Q8N5R6 958 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 ALLCQ8N6M5 410 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 IL17RCQ8NAC3 791 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 TSTD1Q8NFU3 115 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 GPT2Q8TD30 523 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 STK32AQ8WU08 396 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 EDEM1Q92611 657 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 GOLGA1Q92805 767 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 TUBGCP2Q9BSJ2 902 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 NDST4Q9H3R1 872 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 AGO1Q9UL18 857 aaKnown RBP16.86■□□□□ 0.29
COL7A1-203ENST00000459756 KLF8O95600 359 aaPredicted RBP16.85■□□□□ 0.29
COL7A1-203ENST00000459756 GNA15P30679 374 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 TIE1P35590 1138 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 GPD2P43304 727 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 RPL34P49207 117 aaKnown RBP16.85■□□□□ 0.29
COL7A1-203ENST00000459756 HARS2P49590 506 aaKnown RBP16.85■□□□□ 0.29
COL7A1-203ENST00000459756 TRIP4Q15650 581 aaPredicted RBP16.85■□□□□ 0.29
COL7A1-203ENST00000459756 CRY1Q16526 586 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 LPAL2Q16609 132 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 ARHGAP44Q17R89 818 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 EOGTQ5NDL2 527 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 C10orf76Q5T2E6 689 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 MSANTD2Q6P1R3 559 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 DENND1BQ6P3S1 775 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 RBM43Q6ZSC3 357 aaKnown RBP16.85■□□□□ 0.29
COL7A1-203ENST00000459756 TRMT11Q7Z4G4 463 aaKnown RBP16.85■□□□□ 0.29
COL7A1-203ENST00000459756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.85■□□□□ 0.29
COL7A1-203ENST00000459756 DENND1CQ8IV53 801 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 KIAA2013Q8IYS2 634 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 CPXM2Q8N436 756 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 TXNDC5Q8NBS9 432 aaKnown RBP16.85■□□□□ 0.29
COL7A1-203ENST00000459756 ZNF606Q8WXB4 792 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 SHC3Q92529 594 aa16.85■□□□□ 0.29
COL7A1-203ENST00000459756 SPTBN4Q9H254 2564 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 ANTXRLA6NF34 631 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 BECN2A8MW95 431 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 KCNJ18B7U540 433 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 PIK3R2O00459 728 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 SART1O43290 800 aaKnown RBP16.84■□□□□ 0.29
COL7A1-203ENST00000459756 THAP12O43422 761 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 PENKP01210 267 aaPredicted RBP16.84■□□□□ 0.29
COL7A1-203ENST00000459756 LTFP02788 710 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 RETP07949 1114 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 EEF1GP26641 437 aaKnown RBP16.84■□□□□ 0.29
COL7A1-203ENST00000459756 USP8P40818 1118 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 ACADSBP45954 432 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 DGKGP49619 791 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 APBA1Q02410 837 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 KCNJ12Q14500 433 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 HSP90AA4PQ58FG1 418 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 MIIPQ5JXC2 388 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 EMC10Q5UCC4 262 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 CACNA2D4Q7Z3S7 1137 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 FAM217AQ8IXS0 508 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 FAM160A2Q8N612 972 aaPredicted RBP16.84■□□□□ 0.29
COL7A1-203ENST00000459756 SIX2Q9NPC8 291 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 ST7Q9NRC1 585 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 SFMBT1Q9UHJ3 866 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 STARD13Q9Y3M8 1113 aa16.84■□□□□ 0.29
COL7A1-203ENST00000459756 SGK1O00141 431 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 TRIM24O15164 1050 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 LRP3O75074 770 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 ALDH1A2O94788 518 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 CYBBP04839 570 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 EML5Q05BV3 1969 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 TCP11X2Q5H9J9 407 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 FYB2Q5VWT5 728 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 RASSF3Q86WH2 238 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 SCUBE3Q8IX30 993 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 ZNF513Q8N8E2 541 aaPredicted RBP16.83■□□□□ 0.28
COL7A1-203ENST00000459756 ENOX1Q8TC92 643 aaKnown RBP16.83■□□□□ 0.28
COL7A1-203ENST00000459756 CLEC4CQ8WTT0 213 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 BHMTQ93088 406 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 TRIM62Q9BVG3 475 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 SLC4A5Q9BY07 1137 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 MIS12Q9H081 205 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 POLMQ9NP87 494 aaPredicted RBP16.83■□□□□ 0.28
COL7A1-203ENST00000459756 ACP6Q9NPH0 428 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 SAMSN1Q9NSI8 373 aaKnown RBP16.83■□□□□ 0.28
COL7A1-203ENST00000459756 PLK2Q9NYY3 685 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 FBXO10Q9UK96 956 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 DNAJC12Q9UKB3 198 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 NFE2L3Q9Y4A8 694 aa16.83■□□□□ 0.28
COL7A1-203ENST00000459756 ADAM23O75077 832 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 LATS1O95835 1130 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 MBD3O95983 291 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 CISD3P0C7P0 127 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 ZNF445P59923 1031 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 PTK2Q05397 1052 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 ANO7Q6IWH7 933 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 TMEM92Q6UXU6 159 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 LOXL4Q96JB6 756 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 ZC3H10Q96K80 434 aaKnown RBP16.82■□□□□ 0.28
COL7A1-203ENST00000459756 STOML2Q9UJZ1 356 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 SLC27A6Q9Y2P4 619 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 SPAG17Q6Q759 2223 aa16.82■□□□□ 0.28
COL7A1-203ENST00000459756 MYO18AQ92614 2054 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms