RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CYLDQ9NQC7 956 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 PDGFCQ9NRA1 345 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 SPATA2Q9UM82 520 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 ITIH4Q14624 930 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 ZSWIM7Q19AV6 140 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 TTLL9Q3SXZ7 439 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 MPP6Q9NZW5 540 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 DAPK2Q9UIK4 370 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 MED14O60244 1454 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 TNNI3P19429 210 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 PLK1P53350 603 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 C11orf88Q6PI97 169 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 NUDT5Q9UKK9 219 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 UBQLN1Q9UMX0 589 aaKnown RBP20.19■□□□□ 0.82
SNX27-204ENST00000458013 NR6A1Q15406 480 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 POM121L1PQ3SYA9 428 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 KRT77Q7Z794 578 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 PARP8Q8N3A8 854 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 CTNNAL1Q9UBT7 734 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 CPA4Q9UI42 421 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 CPA3P15088 417 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 DMPKQ09013 629 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 SLC44A4Q53GD3 710 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 RIBC2Q9H4K1 309 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 SMPD4Q9NXE4 827 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 TOB1P50616 345 aaPredicted RBP20.18■□□□□ 0.82
SNX27-204ENST00000458013 C19orf18Q8NEA5 215 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 GDPD5Q8WTR4 605 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 RIT2Q99578 217 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 COLEC11Q9BWP8 271 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 ICAM1P05362 532 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 PLA2G12BQ9BX93 195 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 DUSP12Q9UNI6 340 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 BOP1Q14137 746 aaKnown RBP20.18■□□□□ 0.82
SNX27-204ENST00000458013 PKN1Q16512 942 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 HHIPL2Q6UWX4 724 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 UBE2OQ9C0C9 1292 aaKnown RBP20.18■□□□□ 0.82
SNX27-204ENST00000458013 CISHQ9NSE2 258 aa20.18■□□□□ 0.82
SNX27-204ENST00000458013 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.17■□□□□ 0.82
SNX27-204ENST00000458013 CETPP11597 493 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 NCKAP1LP55160 1127 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 TMEM176AQ96HP8 235 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 MIEF1Q9NQG6 463 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 SETD4Q9NVD3 440 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 HS6ST1O60243 411 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 ENTPD3O75355 529 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 MICAL2O94851 1124 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 FAM153BP0C7A2 387 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 MRPS35P82673 323 aaKnown RBP20.17■□□□□ 0.82
SNX27-204ENST00000458013 FAM153CQ494X1 144 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 TMEM26Q6ZUK4 368 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 SPPL2AQ8TCT8 520 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 TRAPPC12Q8WVT3 735 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 PRMT6Q96LA8 375 aaPredicted RBP20.17■□□□□ 0.82
SNX27-204ENST00000458013 FAM120BQ96EK7 910 aaKnown RBP20.17■□□□□ 0.82
SNX27-204ENST00000458013 PPP1R2P1Q96PQ5 205 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 TBCDQ9BTW9 1192 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 DDX43Q9NXZ2 648 aaKnown RBP20.17■□□□□ 0.82
SNX27-204ENST00000458013 YWHAQP27348 245 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 KCTD21Q4G0X4 260 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 NYAP1Q6ZVC0 841 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 EFL1Q7Z2Z2 1120 aaKnown RBP20.17■□□□□ 0.82
SNX27-204ENST00000458013 LRRC6Q86X45 466 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 CHST13Q8NET6 341 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 UBASH3BQ8TF42 649 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 YME1L1Q96TA2 773 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 ZNF189O75820 626 aaPredicted RBP20.17■□□□□ 0.82
SNX27-204ENST00000458013 VDRP11473 427 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 ADIGQ0VDE8 80 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 GRIK3Q13003 919 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 ANKEF1Q9NU02 776 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 WHRNQ9P202 907 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 PLA2R1Q13018 1463 aa20.17■□□□□ 0.82
SNX27-204ENST00000458013 ZNF862O60290 1169 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 TRIM13O60858 407 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 PNPLA4P41247 253 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 SNX30Q5VWJ9 437 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 RNF180Q86T96 592 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 LRRC40Q9H9A6 602 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 C1orf232A0A0U1RR37 186 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 RAG1P15918 1043 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 CYP24A1Q07973 514 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 ZNF57Q68EA5 555 aaPredicted RBP20.16■□□□□ 0.82
SNX27-204ENST00000458013 ZBTB49Q6ZSB9 765 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 CYP4Z1Q86W10 505 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 ERGIC2Q96RQ1 377 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 POMKQ9H5K3 350 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 BATF3Q9NR55 127 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 ADCY10Q96PN6 1610 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 FAM205AQ6ZU69 1335 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 SLC25A27O95847 323 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 SUPT20HL2P0C7V6 817 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 ETS1P14921 441 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 FMO4P31512 558 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 EFCAB3Q8N7B9 438 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 FBXO25Q8TCJ0 367 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 NAALADL1Q9UQQ1 740 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 ITGA9Q13797 1035 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 CGRRF1Q99675 332 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms