RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 RNF139Q8WU17 664 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 FBXO32Q969P5 355 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 FAF2Q96CS3 445 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 TRMT2BQ96GJ1 504 aaKnown RBP9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 B3GALT6Q96L58 329 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 MYRFLQ96LU7 910 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 SERPINB11Q96P15 392 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 PGLYRP2Q96PD5 576 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 SEPT5Q99719 369 aaPredicted RBP9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 EMILIN2Q9BXX0 1053 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 RAB17Q9H0T7 212 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 FAM204AQ9H8W3 233 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 ZWILCHQ9H900 591 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 TLR8Q9NR97 1041 aaKnown RBP9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 STIM2Q9P246 746 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 UXTQ9UBK9 157 aaPredicted RBP9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 RAB21Q9UL25 225 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 ZMYND8Q9ULU4 1186 aaPredicted RBP9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 ASB3Q9Y575 518 aa9.28□□□□□ -0.92
CDC42EP3-204ENST00000457889 KIAA1671Q9BY89 1806 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 LINC01553A4QN01 128 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 CCDC151A5D8V7 595 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 NDC80O14777 642 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 IRAK2O43187 625 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 LPXNO60711 386 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 ERLIN1O75477 346 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 VNN2O95498 520 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 GAS8O95995 478 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZDHHC11BP0C7U3 371 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 TCF4P15884 667 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 SYN1P17600 705 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 CTNNB1P35222 781 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 ARL4AP40617 200 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 HCAR3P49019 387 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 CXCR3P49682 368 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 ARSEP51690 589 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 CDH6P55285 790 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 PPP2R5DQ14738 602 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 BRD3Q15059 726 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 DDR2Q16832 855 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 SMTNL2Q2TAL5 461 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 MAP9Q49MG5 647 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 SNX30Q5VWJ9 437 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 SCYL2Q6P3W7 929 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 KLHDC10Q6PID8 442 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 ELMSAN1Q6PJG2 1045 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 MFSD7Q6UXD7 560 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 CCDC149Q6ZUS6 474 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 TMCO2Q7Z6W1 182 aaPredicted RBP9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 ITIH5Q86UX2 942 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 IFT20Q8IY31 132 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 PRELID2Q8N945 189 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 KLHL23Q8NBE8 558 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 ANKK1Q8NFD2 765 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 SCAMP5Q8TAC9 235 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 CCHCR1Q8TD31 782 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 DQX1Q8TE96 717 aaKnown RBP9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 RAPGEF5Q92565 580 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 NKD2Q969F2 451 aaPredicted RBP9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 MAGOHBQ96A72 148 aaKnown RBP9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 PEBP4Q96S96 227 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 KRT12Q99456 494 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 SNRNP25Q9BV90 132 aaKnown RBP9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 AP1M1Q9BXS5 423 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 MAK16Q9BXY0 300 aaKnown RBP9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 UBE2OQ9C0C9 1292 aaKnown RBP9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 DDIT4Q9NX09 232 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 SMARCAL1Q9NZC9 954 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 PCSK1NQ9UHG2 260 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 DPP7Q9UHL4 492 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 FBXW11Q9UKB1 542 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 AP4E1Q9UPM8 1137 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 NAALADL1Q9UQQ1 740 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 YIPF1Q9Y548 306 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 PCDHA11Q9Y5I1 949 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 CLUHO75153 1309 aa9.27□□□□□ -0.93
CDC42EP3-204ENST00000457889 SLC38A8A6NNN8 435 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 H3BRJ5 948 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 APOC4-APOC2K7ER74 178 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 C2CD2LO14523 706 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 PRRG1O14668 218 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 TEX28O15482 410 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 APOC2P02655 101 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 PFKLP17858 780 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 ATF6P18850 670 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 TGM2P21980 687 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 CCR1P32246 355 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 ADRA1BP35368 520 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 NR2C2P49116 596 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 EPHB3P54753 998 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 DR1Q01658 176 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 RING1Q06587 406 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 EIF4EBP2Q13542 120 aaPredicted RBP9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 CUL1Q13616 776 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 DPYSL3Q14195 570 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 SIX1Q15475 284 aaPredicted RBP9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 KCNT1Q5JUK3 1230 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 SH3PXD2AQ5TCZ1 1133 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 OTUD1Q5VV17 481 aaPredicted RBP9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 DAB2IPQ5VWQ8 1189 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms