RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ETNK2Q9NVF9 386 aa9.11□□□□□ -0.95
RIF1-208ENST00000457745 ASNSD1Q9NWL6 643 aa9.11□□□□□ -0.95
RIF1-208ENST00000457745 PLA2G2EQ9NZK7 142 aa9.11□□□□□ -0.95
RIF1-208ENST00000457745 NEU3Q9UQ49 428 aa9.11□□□□□ -0.95
RIF1-208ENST00000457745 INSL6Q9Y581 213 aa9.11□□□□□ -0.95
RIF1-208ENST00000457745 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.1□□□□□ -0.95
RIF1-208ENST00000457745 ESYT3A0FGR9 886 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 ARHGEF37A1IGU5 675 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 EFCAB8A8MWE9 144 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 TK2O00142 265 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 RFXAPO00287 272 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 MAP3K6O95382 1288 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 GLI1P08151 1106 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 ZDHHC11BP0C7U3 371 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 NCAM1P13591 858 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 COL9A1P20849 921 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 L1CAMP32004 1257 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 NOS2P35228 1153 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 PCK1P35558 622 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 VSNL1P62760 191 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 DYNLT1P63172 113 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 CKAP4Q07065 602 aaKnown RBP9.1□□□□□ -0.95
RIF1-208ENST00000457745 TAF10Q12962 218 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 NME3Q13232 169 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 SNX1Q13596 522 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 TUBB2AQ13885 445 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 RAB33AQ14088 237 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 SLC25A52Q3SY17 297 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 LILRA6Q6PI73 481 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 VSTM1Q6UX27 236 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 ARCQ7LC44 396 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 ADGRD2Q7Z7M1 963 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 DDX42Q86XP3 938 aaKnown RBP eCLIP9.1□□□□□ -0.95
RIF1-208ENST00000457745 NUP93Q8N1F7 819 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 UBL4BQ8N7F7 174 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 EXD1Q8NHP7 514 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 PCDH19Q8TAB3 1148 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 FAM71BQ8TC56 605 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 SPPL2BQ8TCT7 592 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 SLC22A17Q8WUG5 538 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 ANKRD7Q92527 254 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 GOLGA1Q92805 767 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 P2RY11Q96G91 374 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 CALR3Q96L12 384 aaKnown RBP9.1□□□□□ -0.95
RIF1-208ENST00000457745 TUBB2BQ9BVA1 445 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 DCLK3Q9C098 648 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 CCSER2Q9H7U1 834 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 IL21Q9HBE4 155 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 POPDC2Q9HBU9 364 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 PNPLA8Q9NP80 782 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 AFF4Q9UHB7 1163 aaKnown RBP9.1□□□□□ -0.95
RIF1-208ENST00000457745 FZD10Q9ULW2 581 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 SCML2Q9UQR0 700 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 NR2E3Q9Y5X4 410 aa9.1□□□□□ -0.95
RIF1-208ENST00000457745 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.09□□□□□ -0.95
RIF1-208ENST00000457745 C2orf71A6NGG8 1288 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 H0YGN5 161 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 KRIT1O00522 736 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 TRIM66O15016 1216 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 TTI1O43156 1089 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 IRAK2O43187 625 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 TGM5O43548 720 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 SEC31AO94979 1220 aaKnown RBP9.09□□□□□ -0.95
RIF1-208ENST00000457745 URODP06132 367 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 ECHS1P30084 290 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 TERF1P54274 439 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 CDH6P55285 790 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 ITIH3Q06033 890 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 TWF1Q12792 350 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 SLC10A2Q12908 348 aaPredicted RBP9.09□□□□□ -0.95
RIF1-208ENST00000457745 SEMA3BQ13214 749 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 PLD1Q13393 1074 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 CYP1B1Q16678 543 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 UBAP2Q5T6F2 1119 aaKnown RBP9.09□□□□□ -0.95
RIF1-208ENST00000457745 SEL1L2Q5TEA6 688 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 CCDC181Q5TID7 509 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 KIAA1841Q6NSI8 718 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 FBXO38Q6PIJ6 1188 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 STRADAQ7RTN6 431 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 POLNQ7Z5Q5 900 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 C14orf80Q86SX3 495 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 CCDC50Q8IVM0 306 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 PLD5Q8N7P1 536 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 ZNF461Q8TAF7 563 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 PHOSPHO2Q8TCD6 241 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 POF1BQ8WVV4 589 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 CASKIN2Q8WXE0 1202 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 IRGQQ8WZA9 623 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 ZBTB9Q96C00 473 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 FAF2Q96CS3 445 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 SPATA17Q96L03 361 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 FCRL2Q96LA5 508 aaPredicted RBP9.09□□□□□ -0.95
RIF1-208ENST00000457745 SLC22A12Q96S37 553 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 GDF15Q99988 308 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 TCF25Q9BQ70 676 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 TTLL2Q9BWV7 592 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 LRRC3Q9BY71 257 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 PARD6BQ9BYG5 372 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 NKX2-4Q9H2Z4 354 aa9.09□□□□□ -0.95
RIF1-208ENST00000457745 CYP4F11Q9HBI6 524 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms