RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 KAT5Q92993 513 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 TCEAL3Q969E4 200 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 SPACA7Q96KW9 195 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 PCMTD1Q96MG8 357 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 FBXO44Q9H4M3 255 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 KMT2BQ9UMN6 2715 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 LNP1A1A4G5 178 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 PMM2O15305 246 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 P4HA2O15460 535 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 ASS1P00966 412 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 ZDHHC11BP0C7U3 371 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 PBX1P40424 430 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 P2RY2P41231 377 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 DHPSP49366 369 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 SLC5A3P53794 718 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 EXOC3L4Q17RC7 722 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 SCARA5Q6ZMJ2 495 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 PAQR9Q6ZVX9 377 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 FAM35AQ86V20 835 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 UNC93AQ86WB7 457 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 TTC30AQ86WT1 665 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 ERGIC2Q96RQ1 377 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 ARID3AQ99856 593 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 NACA2Q9H009 215 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 SDCBP2Q9H190 292 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 SMYD3Q9H7B4 428 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 TMEM9BQ9NQ34 198 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 FAM207AQ9NSI2 230 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 DEC1Q9P2X7 70 aa14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 EVLQ9UI08 416 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-213ENST00000448520 LAMA1P25391 3075 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 GTPBP10A4D1E9 387 aaKnown RBP14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 SGK1O00141 431 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 ZBTB24O43167 697 aaPredicted RBP14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 HOXC11O43248 304 aaPredicted RBP14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 CBFA2T2O43439 604 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 AP1G2O75843 785 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 ADCY5O95622 1261 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 BCKDHBP21953 392 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 LMAN2Q12907 356 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 EMC10Q5UCC4 262 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 PSAPL1Q6NUJ1 521 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 HTR3DQ70Z44 454 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 RRAGAQ7L523 313 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 ACOT1Q86TX2 421 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 C12orf40Q86WS4 652 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 ETFBKMTQ8IXQ9 262 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 FUKQ8N0W3 1084 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 PIGKQ92643 395 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 ZFRQ96KR1 1074 aaKnown RBP14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 NT5C1BQ96P26 610 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 GANQ9H2C0 597 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 CSNK1G1Q9HCP0 422 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 TLR8Q9NR97 1041 aaKnown RBP14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 SPHK2Q9NRA0 654 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 BCCIPQ9P287 314 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 STARD13Q9Y3M8 1113 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 FHOD1Q9Y613 1164 aa14.46□□□□□ -0.09
PDLIM2-213ENST00000448520 ANTXRLA6NF34 631 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 CDX4O14627 284 aaPredicted RBP14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 SCAMP3O14828 347 aaKnown RBP14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 CHRM1P11229 460 aaPredicted RBP14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 CEACAM1P13688 526 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 HNRNPLP14866 589 aaKnown RBP eCLIP14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 CSRP1P21291 193 aaKnown RBP14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 NOVA1P51513 510 aaKnown RBP14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 IRX4P78413 519 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 GOLGA8FQ08AF8 430 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 GOLGA8DPQ0D2H9 430 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 MESP2Q0VG99 397 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 CETN1Q12798 172 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 SYT12Q8IV01 421 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 PGBD3Q8N328 593 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 PHTF2Q8N3S3 785 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 KREMEN1Q96MU8 473 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 NUSAP1Q9BXS6 441 aaKnown RBP14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 DNAI2Q9GZS0 605 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 CCSER2Q9H7U1 834 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 GMIPQ9P107 970 aa14.45□□□□□ -0.1
PDLIM2-213ENST00000448520 RNF225M0QZC1 329 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 TLR5O60602 858 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 ADAM23O75077 832 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 TULP3O75386 442 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 PNMA6AP0CW24 399 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 HOXD12P35452 270 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 ATP5C1P36542 298 aaKnown RBP14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 ASPAP45381 313 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 NDST1P52848 882 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 KDSRQ06136 332 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 ANO4Q32M45 955 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 MAP7D1Q3KQU3 841 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 KLHDC7AQ5VTJ3 777 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 SDE2Q6IQ49 451 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 SLC36A4Q6YBV0 504 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 TMC6Q7Z403 805 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 TMEM25Q86YD3 366 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 VSTM4Q8IW00 320 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 SFTPA1Q8IWL2 248 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 BBS7Q8IWZ6 715 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 PPM1KQ8N3J5 372 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms