RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 UGT1A9O60656 530 aa3□□□□□ -1.93
CHD9-203ENST00000447540 MYO1DO94832 1006 aa3□□□□□ -1.93
CHD9-203ENST00000447540 DLGAP3O95886 979 aa3□□□□□ -1.93
CHD9-203ENST00000447540 ATF7P17544 494 aaPredicted RBP3□□□□□ -1.93
CHD9-203ENST00000447540 UGT1A6P19224 532 aa3□□□□□ -1.93
CHD9-203ENST00000447540 UGT1A4P22310 534 aa3□□□□□ -1.93
CHD9-203ENST00000447540 UGT1A3P35503 534 aa3□□□□□ -1.93
CHD9-203ENST00000447540 UGT1A5P35504 534 aa3□□□□□ -1.93
CHD9-203ENST00000447540 SERPINB5P36952 375 aa3□□□□□ -1.93
CHD9-203ENST00000447540 HADHAP40939 763 aa3□□□□□ -1.93
CHD9-203ENST00000447540 CCNFP41002 786 aa3□□□□□ -1.93
CHD9-203ENST00000447540 PIK3CBP42338 1070 aa3□□□□□ -1.93
CHD9-203ENST00000447540 TPTEP56180 551 aa3□□□□□ -1.93
CHD9-203ENST00000447540 P2RX3P56373 397 aa3□□□□□ -1.93
CHD9-203ENST00000447540 PTPN12Q05209 780 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 SAMD4BQ5PRF9 694 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 SLC9C2Q5TAH2 1124 aa3□□□□□ -1.93
CHD9-203ENST00000447540 KLHDC10Q6PID8 442 aa3□□□□□ -1.93
CHD9-203ENST00000447540 REXO1Q8N1G1 1221 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 BTBD6Q96KE9 485 aa3□□□□□ -1.93
CHD9-203ENST00000447540 UGT1A7Q9HAW7 530 aa3□□□□□ -1.93
CHD9-203ENST00000447540 UGT1A10Q9HAW8 530 aa3□□□□□ -1.93
CHD9-203ENST00000447540 UGT1A8Q9HAW9 530 aa3□□□□□ -1.93
CHD9-203ENST00000447540 CTNND2Q9UQB3 1225 aa3□□□□□ -1.93
CHD9-203ENST00000447540 EIF3LQ9Y262 564 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 PPRC1Q5VV67 1664 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 LMTK3Q96Q04 1460 aa3□□□□□ -1.93
CHD9-203ENST00000447540 CCDC182A6NF36 153 aa3□□□□□ -1.93
CHD9-203ENST00000447540 H3BMM5 538 aa3□□□□□ -1.93
CHD9-203ENST00000447540 PHGDHO43175 533 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 PSTPIP1O43586 416 aa3□□□□□ -1.93
CHD9-203ENST00000447540 ALBP02768 609 aa3□□□□□ -1.93
CHD9-203ENST00000447540 CYP19A1P11511 503 aaPredicted RBP3□□□□□ -1.93
CHD9-203ENST00000447540 RPS2P15880 293 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 PDGFRAP16234 1089 aa3□□□□□ -1.93
CHD9-203ENST00000447540 PSMC2P35998 433 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 BRCC3P46736 316 aa3□□□□□ -1.93
CHD9-203ENST00000447540 RAD23AP54725 363 aa3□□□□□ -1.93
CHD9-203ENST00000447540 PDK2Q15119 407 aa3□□□□□ -1.93
CHD9-203ENST00000447540 Q3ZCU0 254 aa3□□□□□ -1.93
CHD9-203ENST00000447540 TTC38Q5R3I4 469 aa3□□□□□ -1.93
CHD9-203ENST00000447540 MIB1Q86YT6 1006 aa3□□□□□ -1.93
CHD9-203ENST00000447540 RASGEF1CQ8N431 466 aa3□□□□□ -1.93
CHD9-203ENST00000447540 OR8K5Q8NH50 307 aa3□□□□□ -1.93
CHD9-203ENST00000447540 URGCPQ8TCY9 931 aa3□□□□□ -1.93
CHD9-203ENST00000447540 GANCQ8TET4 914 aa3□□□□□ -1.93
CHD9-203ENST00000447540 SLC25A36Q96CQ1 311 aa3□□□□□ -1.93
CHD9-203ENST00000447540 RPRD1AQ96P16 312 aaPredicted RBP3□□□□□ -1.93
CHD9-203ENST00000447540 MYLK2Q9H1R3 596 aa3□□□□□ -1.93
CHD9-203ENST00000447540 MMP27Q9H306 513 aa3□□□□□ -1.93
CHD9-203ENST00000447540 DPEP3Q9H4B8 488 aa3□□□□□ -1.93
CHD9-203ENST00000447540 AZI2Q9H6S1 392 aa3□□□□□ -1.93
CHD9-203ENST00000447540 MANSC1Q9H8J5 431 aa3□□□□□ -1.93
CHD9-203ENST00000447540 MRPL47Q9HD33 250 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 NECTIN3Q9NQS3 549 aa3□□□□□ -1.93
CHD9-203ENST00000447540 MKS1Q9NXB0 559 aa3□□□□□ -1.93
CHD9-203ENST00000447540 HMGXB4Q9UGU5 601 aa3□□□□□ -1.93
CHD9-203ENST00000447540 CCDC154A6NI56 674 aa3□□□□□ -1.93
CHD9-203ENST00000447540 TMEM253P0C7T8 217 aa3□□□□□ -1.93
CHD9-203ENST00000447540 ADCY8P40145 1251 aa3□□□□□ -1.93
CHD9-203ENST00000447540 TRIM32Q13049 653 aa3□□□□□ -1.93
CHD9-203ENST00000447540 AUHQ13825 339 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 MTF1Q14872 753 aa3□□□□□ -1.93
CHD9-203ENST00000447540 ATP13A5Q4VNC0 1218 aa3□□□□□ -1.93
CHD9-203ENST00000447540 ARMC4Q5T2S8 1044 aa3□□□□□ -1.93
CHD9-203ENST00000447540 MPP7Q5T2T1 576 aa3□□□□□ -1.93
CHD9-203ENST00000447540 RORBQ92753 470 aa3□□□□□ -1.93
CHD9-203ENST00000447540 NLRP3Q96P20 1036 aa3□□□□□ -1.93
CHD9-203ENST00000447540 BDH2Q9BUT1 245 aa3□□□□□ -1.93
CHD9-203ENST00000447540 hCG_1984214I3L0E3 225 aa3□□□□□ -1.93
CHD9-203ENST00000447540 TRAF5O00463 557 aa3□□□□□ -1.93
CHD9-203ENST00000447540 KIAA0355O15063 1070 aa3□□□□□ -1.93
CHD9-203ENST00000447540 SSX5O60225 188 aa3□□□□□ -1.93
CHD9-203ENST00000447540 LRRN2O75325 713 aa3□□□□□ -1.93
CHD9-203ENST00000447540 ZNF254O75437 659 aa3□□□□□ -1.93
CHD9-203ENST00000447540 PMPCBO75439 489 aa3□□□□□ -1.93
CHD9-203ENST00000447540 ITGB6P18564 788 aa3□□□□□ -1.93
CHD9-203ENST00000447540 ALDH1A3P47895 512 aa3□□□□□ -1.93
CHD9-203ENST00000447540 MRPS22P82650 360 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 AP3B2Q13367 1082 aa3□□□□□ -1.93
CHD9-203ENST00000447540 OXA1LQ15070 435 aa3□□□□□ -1.93
CHD9-203ENST00000447540 AOC3Q16853 763 aa3□□□□□ -1.93
CHD9-203ENST00000447540 TBRG1Q3YBR2 411 aa3□□□□□ -1.93
CHD9-203ENST00000447540 KHDC1Q4VXA5 237 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 C4orf46Q504U0 113 aa3□□□□□ -1.93
CHD9-203ENST00000447540 TMEM67Q5HYA8 995 aa3□□□□□ -1.93
CHD9-203ENST00000447540 FAM83BQ5T0W9 1011 aa3□□□□□ -1.93
CHD9-203ENST00000447540 LIN9Q5TKA1 542 aa3□□□□□ -1.93
CHD9-203ENST00000447540 LRRC66Q68CR7 880 aa3□□□□□ -1.93
CHD9-203ENST00000447540 OTUD7BQ6GQQ9 843 aa3□□□□□ -1.93
CHD9-203ENST00000447540 ECHDC2Q86YB7 292 aa3□□□□□ -1.93
CHD9-203ENST00000447540 CAMKK1Q8N5S9 505 aa3□□□□□ -1.93
CHD9-203ENST00000447540 DDX51Q8N8A6 666 aaKnown RBP eCLIP3□□□□□ -1.938e-7■■■■■ 29.2
CHD9-203ENST00000447540 CELF1Q92879 486 aaKnown RBP3□□□□□ -1.93
CHD9-203ENST00000447540 KCNN1Q92952 543 aa3□□□□□ -1.93
CHD9-203ENST00000447540 AP2M1Q96CW1 435 aa3□□□□□ -1.93
CHD9-203ENST00000447540 ZNF641Q96N77 438 aaPredicted RBP3□□□□□ -1.93
CHD9-203ENST00000447540 KCNN2Q9H2S1 579 aa3□□□□□ -1.93
CHD9-203ENST00000447540 SLC12A5Q9H2X9 1139 aa3□□□□□ -1.93
CHD9-203ENST00000447540 CD93Q9NPY3 652 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms