RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 CASP10Q92851 521 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 HVCN1Q96D96 273 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 MBD6Q96DN6 1003 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 MSLNLQ96KJ4 702 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 UROC1Q96N76 676 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 GAD1Q99259 594 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 PYM1Q9BRP8 204 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 YIPF4Q9BSR8 244 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 CCDC94Q9BW85 323 aaPredicted RBP8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 KLC2Q9H0B6 622 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 ZBP1Q9H171 429 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 ST6GALNAC4Q9H4F1 302 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 CD248Q9HCU0 757 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 PTPRHQ9HD43 1115 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 BLOC1S4Q9NUP1 217 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 SLC38A7Q9NVC3 462 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 CD207Q9UJ71 328 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 ATP6V1DQ9Y5K8 247 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 ATG2AQ2TAZ0 1938 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 TMEM189-UBE2V1I3L0A0 370 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 SPTLC2O15270 562 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 GPR42O15529 346 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 CUTAO60888 179 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 TBCAO75347 108 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 DDHD2O94830 711 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 CXCL14O95715 111 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 PIGRP01833 764 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 SOD2P04179 222 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 KRT18P05783 430 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 GAP43P17677 238 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 PROZP22891 400 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 PAX3P23760 479 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 MARCKSP29966 332 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 LTBRP36941 435 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 ACVRL1P37023 503 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 NDUFV1P49821 464 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 AMPD3Q01432 767 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 TUSC3Q13454 348 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 ALCAMQ13740 583 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 KCNC3Q14003 757 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 KARSQ15046 597 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 STK38Q15208 465 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 SMAD2Q15796 467 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 ZNF568Q3ZCX4 644 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 XKR4Q5GH76 650 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 PDXDC1Q6P996 788 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 CYP26C1Q6V0L0 522 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 FAM178BQ8IXR5 827 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 RNF168Q8IYW5 571 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 GSTCDQ8NEC7 633 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 USP28Q96RU2 1077 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 PLEKHA5Q9HAU0 1116 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 MAGEF1Q9HAY2 307 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 MRPL17Q9NRX2 175 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 HES2Q9Y543 173 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 TIMM13Q9Y5L4 95 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 X6R8D5 127 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 SF3B1O75533 1304 aaKnown RBP eCLIP8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 CITO14578 2027 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 XIRP2A4UGR9 3374 aa8.44□□□□□ -1.06
SMARCE1-206ENST00000447024 TCF20Q9UGU0 1960 aaKnown RBP8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 NPEPPSL1A6NEC2 478 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 CYR61O00622 381 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 SLC16A4O15374 487 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 CLDN3O15551 220 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 RECQL4O94761 1208 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 POMCP01189 267 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 URODP06132 367 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 CLTAP09496 248 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 KCNE1P15382 129 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 OR1G1P47890 313 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 SCNN1GP51170 649 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 KCNQ1P51787 676 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 DSG1Q02413 1049 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 ITIH3Q06033 890 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 MCL1Q07820 350 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 BECN1Q14457 450 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 NOLC1Q14978 699 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 POSTNQ15063 836 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 USP41Q3LFD5 358 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 LONRF3Q496Y0 759 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 PLPP4Q5VZY2 271 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 CNNM4Q6P4Q7 775 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 ALKAL1Q6UXT8 129 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 CEP68Q76N32 757 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 HAUS6Q7Z4H7 955 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 ADHFE1Q8IWW8 467 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 MYCT1Q8N699 235 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 HDAC7Q8WUI4 952 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 EPSTI1Q96J88 318 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 MRGPRX3Q96LB0 322 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 NECTIN4Q96NY8 510 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 ACAP3Q96P50 834 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 CDK5RAP1Q96SZ6 601 aaKnown RBP8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 REEP2Q9BRK0 252 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 TCHPQ9BT92 498 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 KIFC3Q9BVG8 833 aa8.43□□□□□ -1.06
SMARCE1-206ENST00000447024 HERC2P3Q9BVR0 1158 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms