RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 HNRNPCL3B7ZW38 293 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 INO80B-WBP1J3KQ70 363 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 B3GALNT1O75752 331 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 HNRNPCL4P0DMR1 293 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PSMA2P25787 234 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ABATP80404 500 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 GPSM2P81274 684 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CHRNB3Q05901 458 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TP53BP2Q13625 1128 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SEL1L3Q68CR1 1132 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 FRMD7Q6ZUT3 714 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CDKL3Q8IVW4 592 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 RBM15BQ8NDT2 890 aaKnown RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF420Q8TAQ5 688 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ZHX1-C8orf76Q96EF9 292 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 RUBCNLQ9H714 662 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SLCO1B3Q9NPD5 702 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 FRMPD4Q14CM0 1322 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF609O15014 1411 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 KIAA1210Q9ULL0 1709 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 RNF103O00237 685 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 TLR3O15455 904 aaKnown RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 PRPSAP2O60256 369 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ABL1P00519 1130 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 S100A6P06703 90 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 TFE3P19532 575 aaPredicted RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ITGA6P23229 1130 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 NEK3P51956 506 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 NME5P56597 212 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 TRIM32Q13049 653 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 CCNG2Q16589 344 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 GARNL3Q5VVW2 1013 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF746Q6NUN9 644 aaPredicted RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ZCCHC8Q6NZY4 707 aaKnown RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ARMC8Q8IUR7 673 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 RNASE11Q8TAA1 199 aaKnown RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 PIGBQ92521 554 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 USP13Q92995 863 aaPredicted RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 MED30Q96HR3 178 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 HPS4Q9NQG7 708 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ARMC1Q9NVT9 282 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 TOR4AQ9NXH8 423 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 MLXQ9UH92 298 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 PFDN2Q9UHV9 154 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 SIK3Q9Y2K2 1263 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 MYPNQ86TC9 1320 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 H3BSA7 217 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ZBTB39O15060 712 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 KMOO15229 486 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ITM2AO43736 263 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ATF6P18850 670 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 F8A1P23610 371 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 SPIRE1Q08AE8 756 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 NME3Q13232 169 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 MSLNQ13421 630 aaPredicted RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ALX1Q15699 326 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ANO4Q32M45 955 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 HABP4Q5JVS0 413 aaKnown RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 CRTC3Q6UUV7 619 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 OR7G1Q8NGA0 311 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 MCFD2Q8NI22 146 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 WDR36Q8NI36 951 aaKnown RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 SH3KBP1Q96B97 665 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 SGF29Q96ES7 293 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 PHF12Q96QT6 1004 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 AGXT2Q9BYV1 514 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 SEMA6AQ9H2E6 1030 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 TPK1Q9H3S4 243 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 RMND5AQ9H871 391 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 SRP68Q9UHB9 627 aaKnown RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 GGA1Q9UJY5 639 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 PLCL2Q9UPR0 1127 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 NEURL4Q96JN8 1562 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 TRIM38O00635 465 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 KCNQ2O43526 872 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 P4HBP07237 508 aaKnown RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 PDGFRBP09619 1106 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 KPNA1P52294 538 aaPredicted RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 FAM47CQ5HY64 1035 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 PAGE2BQ5JRK9 111 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 BNIPLQ7Z465 357 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF804AQ7Z570 1209 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 TRABD2AQ86V40 505 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ZCCHC9Q8N567 271 aaKnown RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 LRRC17Q8N6Y2 441 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 PSTPIP2Q9H939 334 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 KIF1AQ12756 1690 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 FAM237BA0A1B0GVD1 139 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ISPDA4D126 451 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 TMEM221A6NGB7 291 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ZBTB5O15062 677 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 MED7O43513 233 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 PLEKHA8P1O95397 391 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 MYCP01106 439 aaPredicted RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 COX4I1P13073 169 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 GTF2H1P32780 548 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 SLC1A6P48664 564 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ABCB5Q2M3G0 1257 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 GALNTL6Q49A17 601 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 C6orf52Q5T4I8 152 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms