RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 ELOVL4Q9GZR5 314 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 RUBCNLQ9H714 662 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 EFCAB1Q9HAE3 211 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 RXFP1Q9HBX9 757 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 TLR8Q9NR97 1041 aaKnown RBP6.59□□□□□ -1.35
CNOT1-202ENST00000441024 LATS2Q9NRM7 1088 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 SETD4Q9NVD3 440 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 GPATCH2LQ9NWQ4 482 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 DDX43Q9NXZ2 648 aaKnown RBP6.59□□□□□ -1.35
CNOT1-202ENST00000441024 NINJ2Q9NZG7 142 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 VTI1BQ9UEU0 232 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 CRLS1Q9UJA2 301 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 RUVBL2Q9Y230 463 aaKnown RBP6.59□□□□□ -1.35
CNOT1-202ENST00000441024 EIF3LQ9Y262 564 aaKnown RBP6.59□□□□□ -1.35
CNOT1-202ENST00000441024 ACOT9Q9Y305 439 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 PCDHB5Q9Y5E4 795 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 CDK5RAP2Q96SN8 1893 aa6.59□□□□□ -1.35
CNOT1-202ENST00000441024 DCDC2CA8MYV0 355 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 H0Y626 953 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 RBAK-RBAKDNI3L0D1 243 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 OPLAHO14841 1288 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 CABYRO75952 493 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 ABHD2P08910 425 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 SCTRP47872 440 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 CDK7P50613 346 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 SOX10P56693 466 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 PPP3CAQ08209 521 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 ZNF844Q08AG5 666 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 TWF1Q12792 350 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 GRIK5Q16478 980 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 HIST2H2ACQ16777 129 aaPredicted RBP6.59□□□□□ -1.36
CNOT1-202ENST00000441024 FBXW10Q5XX13 1052 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 HIST2H2AA3Q6FI13 130 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 HTR3CQ8WXA8 447 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 LZICQ8WZA0 190 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 SHC3Q92529 594 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 CPNE1Q99829 537 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 SEMA4AQ9H3S1 761 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 DNAJC18Q9H819 358 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 AURKCQ9UQB9 309 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 PRG3Q9Y2Y8 225 aaPredicted RBP6.59□□□□□ -1.36
CNOT1-202ENST00000441024 RAD54BQ9Y620 910 aa6.59□□□□□ -1.36
CNOT1-202ENST00000441024 TBC1D4O60343 1298 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 LGALS2P05162 132 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 SPATA31C1P0DKV0 1188 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 IRF1P10914 325 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 CPA3P15088 417 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 CHRM3P20309 590 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 GLRA2P23416 452 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 PTPN4P29074 926 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 ADORA2AP29274 412 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 CRABP2P29373 138 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 GP5P40197 560 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 SERPINB10P48595 397 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 SFSWAPQ12872 951 aaKnown RBP6.58□□□□□ -1.36
CNOT1-202ENST00000441024 MPP3Q13368 585 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 ORC1Q13415 861 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 CDH18Q13634 790 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 ACVR2BQ13705 512 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 SMAD1Q15797 465 aaKnown RBP6.58□□□□□ -1.36
CNOT1-202ENST00000441024 ADRM1Q16186 407 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 SPDYAQ5MJ70 313 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 FAXCQ5TGI0 409 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 DENND1BQ6P3S1 775 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 WDR59Q6PJI9 974 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 STRA8Q7Z7C7 330 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 JADE3Q92613 823 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 MRPS31Q92665 395 aaKnown RBP6.58□□□□□ -1.36
CNOT1-202ENST00000441024 DACT3Q96B18 629 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-202ENST00000441024 APOPT1Q96IL0 206 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 MFSD14AQ96MC6 490 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 SERPINB11Q96P15 392 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 OSMRQ99650 979 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 FAM124BQ9H5Z6 455 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-202ENST00000441024 NOD2Q9HC29 1040 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 SCUBE2Q9NQ36 999 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 IARS2Q9NSE4 1012 aaKnown RBP6.58□□□□□ -1.36
CNOT1-202ENST00000441024 SOX13Q9UN79 622 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 PAPPA2Q9BXP8 1791 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 COL1A2P08123 1366 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 SLC15A5A6NIM6 579 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 C5orf58C9J3I9 102 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 CHADO15335 359 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 ZNF286BP0CG31 522 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 TMEM132BQ14DG7 1078 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 AMHR2Q16671 573 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 WLSQ5T9L3 541 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 CACHD1Q5VU97 1274 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 OVOS1Q6IE37 1185 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 LRRC8BQ6P9F7 803 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 CYB5D1Q6P9G0 228 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 MFSD7Q6UXD7 560 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 ITIH5Q86UX2 942 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 FAM131BQ86XD5 332 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 CCDC60Q8IWA6 550 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-202ENST00000441024 EMC1Q8N766 993 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 EME1Q96AY2 570 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 C18orf25Q96B23 403 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-202ENST00000441024 DTNBP1Q96EV8 351 aa6.58□□□□□ -1.36
CNOT1-202ENST00000441024 HSFY1Q96LI6 401 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms