RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PIK3CDO00329 1044 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 ZBTB39O15060 712 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 RAMP2O60895 175 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 P3H2Q8IVL5 708 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 ADAM33Q9BZ11 813 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 PCDH9Q9HC56 1237 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 NCKIPSDQ9NZQ3 722 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 MROH7Q68CQ1 1323 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 GPC1P35052 558 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 KLC1Q07866 573 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 ZC4H2Q9NQZ6 224 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 TUFMP49411 452 aaKnown RBP16.3■□□□□ 0.2
PTPN13-204ENST00000436978 PEX5P50542 639 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 TMC7Q7Z402 723 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 SNCAIPQ9Y6H5 919 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 SGCGQ13326 291 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 TMEM119Q4V9L6 283 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 MARC1Q5VT66 337 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 KDM7AQ6ZMT4 941 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 PRR23D1E9PI22 279 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 PRR23D2P0DMB1 279 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 OR1E1P30953 314 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 RXRGP48443 463 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 SKP1P63208 163 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 NAB1Q13506 487 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 EFCAB1Q9HAE3 211 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 ADCY3O60266 1144 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 RARGP13631 454 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 PTPN3P26045 913 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 PBLDP30039 288 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 FAM171A1Q5VUB5 890 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 ADGRA1Q86SQ6 560 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 TERB1Q8NA31 727 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 KRT20P35900 424 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 BLVRAP53004 296 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 WDR41Q9HAD4 459 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 NCF1BA6NI72 391 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 NCF1CA8MVU1 366 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 M0R3G1 203 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 IGSF6O95976 241 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 NCF1P14598 390 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 ALDH6A1Q02252 535 aaKnown RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 GCNT1Q02742 428 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 ATP6AP1LQ52LC2 224 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 KCNT1Q5JUK3 1230 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 OTOP1Q7RTM1 612 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 ACKR2O00590 384 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 HPGDP15428 266 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 TCN1P20061 433 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 YWHAQP27348 245 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 CRABP2P29373 138 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 NDST1P52848 882 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 SLC12A3P55017 1021 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 E2F4Q16254 413 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 CSGALNACT1Q8TDX6 532 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 RGPD8O14715 1765 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 NRCAMQ92823 1304 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 TMEM114B3SHH9 223 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 GRK2P25098 689 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 DSG1Q02413 1049 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 PRMT9Q6P2P2 845 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 OR2W6PQ8NHA6 318 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 EVA1BQ9NVM1 165 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 ATN1P54259 1190 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 CDC16Q13042 620 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 PGS1Q32NB8 556 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 PPM1LQ5SGD2 360 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 BTNL9Q6UXG8 535 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 C10orf53Q8N6V4 93 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 TDRD5Q8NAT2 981 aaKnown RBP16.29■□□□□ 0.2
PTPN13-204ENST00000436978 TAS1R2Q8TE23 839 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 CIPCQ9C0C6 399 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 CTNNAL1Q9UBT7 734 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 TMCC3Q9ULS5 477 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 NCKAP1Q9Y2A7 1128 aa16.29■□□□□ 0.2
PTPN13-204ENST00000436978 GNG14A0A1W2PPG7 69 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 PCDH8O95206 1070 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 DEFA1P59665 94 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 DEFA3P59666 94 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 RETSATQ6NUM9 610 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 IYDQ6PHW0 289 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 NT5DC3Q86UY8 548 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 COLGALT1Q8NBJ5 622 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 THAP11Q96EK4 314 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 MIEF1Q9NQG6 463 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 STK39Q9UEW8 545 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 POLG2Q9UHN1 485 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 PSMD12O00232 456 aaPredicted RBP16.28■□□□□ 0.2
PTPN13-204ENST00000436978 AKAP3O75969 853 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 USP1O94782 785 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 TRIP4Q15650 581 aaPredicted RBP16.28■□□□□ 0.2
PTPN13-204ENST00000436978 CPNE1Q99829 537 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 DGKIO75912 1065 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 TCF3P15923 654 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms