RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 PTPRHQ9HD43 1115 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 PICK1Q9NRD5 415 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 SPDYE16A6NNV3 312 aaPredicted RBP16.29■□□□□ 0.2
GHDC-203ENST00000428494 LACTBL1A8MY62 500 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 CIB2O75838 187 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 KRT38O76015 456 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 KCNA4P22459 653 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
GHDC-203ENST00000428494 CCNFP41002 786 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 PDE1BQ01064 536 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 STX3Q13277 289 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 ZRSR2Q15696 482 aaKnown RBP16.29■□□□□ 0.2
GHDC-203ENST00000428494 CCDC14Q49A88 953 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 FAM47CQ5HY64 1035 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 LGSNQ5TDP6 509 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 CWF19L1Q69YN2 538 aaKnown RBP16.29■□□□□ 0.2
GHDC-203ENST00000428494 CATSPERGQ6ZRH7 1159 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 ZNF534Q76KX8 674 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 ZBTB8OSQ8IWT0 167 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 PYDC1Q8WXC3 89 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 TUBGCP5Q96RT8 1024 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 KLC2Q9H0B6 622 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 ZCWPW1Q9H0M4 648 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 ANGPTL2Q9UKU9 493 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 TRIP11Q15643 1979 aa16.29■□□□□ 0.2
GHDC-203ENST00000428494 A0A088AWK7 358 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 ZBTB42B2RXF5 422 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 GPR25O00155 361 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 TRDMT1O14717 391 aaKnown RBP16.28■□□□□ 0.2
GHDC-203ENST00000428494 GSRP00390 522 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 LYNP07948 512 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 TFE3P19532 575 aaPredicted RBP16.28■□□□□ 0.2
GHDC-203ENST00000428494 CPOXP36551 454 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 RPL10AP62906 217 aaKnown RBP16.28■□□□□ 0.2
GHDC-203ENST00000428494 SURF1Q15526 300 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 IER5Q5VY09 327 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 JADE1Q6IE81 842 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 RAPH1Q70E73 1250 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 NETO2Q8NC67 525 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 NDE1Q9NXR1 346 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 PHIPQ8WWQ0 1821 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.28■□□□□ 0.2
GHDC-203ENST00000428494 ARHGAP42A6NI28 874 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 SDR42E2A6NKP2 422 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 APOL1O14791 398 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 PROZP22891 400 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 CRHR1P34998 444 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 SLC10A2Q12908 348 aaPredicted RBP16.28■□□□□ 0.2
GHDC-203ENST00000428494 ACAP1Q15027 740 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 TRMT5Q32P41 509 aaKnown RBP16.28■□□□□ 0.2
GHDC-203ENST00000428494 HSDL1Q3SXM5 330 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 TSHZ1Q6ZSZ6 1077 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 TRIM42Q8IWZ5 723 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 GALNT15Q8N3T1 639 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 EFCAB3Q8N7B9 438 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 PPP1R14CQ8TAE6 165 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 ECSITQ9BQ95 431 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 CDT1Q9H211 546 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 R3HDMLQ9H3Y0 253 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 RPF1Q9H9Y2 349 aaKnown RBP16.28■□□□□ 0.2
GHDC-203ENST00000428494 PCDH18Q9HCL0 1135 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 ANK1P16157 1881 aa16.28■□□□□ 0.2
GHDC-203ENST00000428494 E2F8A0AVK6 867 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 SERPINA6P08185 405 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 AP2B1P63010 937 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 GBE1Q04446 702 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 FASTKD1Q53R41 847 aaKnown RBP16.27■□□□□ 0.2
GHDC-203ENST00000428494 RNF111Q6ZNA4 994 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 DENND5BQ6ZUT9 1274 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 SCUBE3Q8IX30 993 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 DEPDC1BQ8WUY9 529 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 FGD4Q96M96 766 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 XAB2Q9HCS7 855 aaKnown RBP16.27■□□□□ 0.2
GHDC-203ENST00000428494 DNAJC16Q9Y2G8 782 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 NDST1P52848 882 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 ATXN1P54253 815 aaKnown RBP16.27■□□□□ 0.2
GHDC-203ENST00000428494 DSG1Q02413 1049 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 CDC16Q13042 620 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 PEX6Q13608 980 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 PRKG1Q13976 671 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 C6orf163Q5TEZ5 329 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 RSPH3Q86UC2 560 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 FAM172AQ8WUF8 416 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 SEPT1Q8WYJ6 367 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 EBNA1BP2Q99848 306 aaKnown RBP16.27■□□□□ 0.2
GHDC-203ENST00000428494 EBF3Q9H4W6 596 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 DDX43Q9NXZ2 648 aaKnown RBP16.27■□□□□ 0.2
GHDC-203ENST00000428494 IL1RAPL1Q9NZN1 696 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 TSPAN16Q9UKR8 245 aa16.27■□□□□ 0.2
GHDC-203ENST00000428494 EVPLQ92817 2033 aa16.27■□□□□ 0.19
GHDC-203ENST00000428494 FAM159BA6NKW6 160 aa16.26■□□□□ 0.19
GHDC-203ENST00000428494 ACKR2O00590 384 aa16.26■□□□□ 0.19
GHDC-203ENST00000428494 SNUPNO95149 360 aaKnown RBP16.26■□□□□ 0.19
GHDC-203ENST00000428494 CLCN3P51790 818 aa16.26■□□□□ 0.19
GHDC-203ENST00000428494 EPHB1P54762 984 aa16.26■□□□□ 0.19
GHDC-203ENST00000428494 TUBB3Q13509 450 aa16.26■□□□□ 0.19
GHDC-203ENST00000428494 VWA5B1Q5TIE3 1220 aa16.26■□□□□ 0.19
GHDC-203ENST00000428494 FAM160B1Q5W0V3 765 aa16.26■□□□□ 0.19
GHDC-203ENST00000428494 DPY19L2Q6NUT2 758 aa16.26■□□□□ 0.19
GHDC-203ENST00000428494 MAP7D3Q8IWC1 876 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms