RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 XKR3Q5GH77 459 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 RBM44Q6ZP01 1051 aaKnown RBP11.42□□□□□ -0.58
TNC-203ENST00000423613 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
TNC-203ENST00000423613 JAMLQ86YT9 394 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 SLC44A2Q8IWA5 706 aaPredicted RBP11.42□□□□□ -0.58
TNC-203ENST00000423613 SCFD2Q8WU76 684 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 ABI2Q9NYB9 513 aaPredicted RBP11.42□□□□□ -0.58
TNC-203ENST00000423613 LRRC7Q96NW7 1537 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 USP42Q9H9J4 1324 aaKnown RBP11.42□□□□□ -0.58
TNC-203ENST00000423613 GRK3P35626 688 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 PRIM2P49643 509 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 CCT8P50990 548 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 RBP5P82980 135 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 CBFBQ13951 182 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 NFYCQ13952 458 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 NFIXQ14938 502 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 CARTPTQ16568 116 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 PDPK2PQ6A1A2 396 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 USP49Q70CQ1 688 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 SLC38A7Q9NVC3 462 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 CYP39A1Q9NYL5 469 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 WDR35Q9P2L0 1181 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 SLC12A4Q9UP95 1085 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 CYP2C9P11712 490 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 WEE1P30291 646 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 VBP1P61758 197 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 STX5Q13190 355 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 WASHC2DQ5SRD0 308 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 TUBA3EQ6PEY2 450 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 PARP8Q8N3A8 854 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 CAMKK1Q8N5S9 505 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 CERKQ8TCT0 537 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 KCTD4Q8WVF5 259 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 EPB41L1Q9H4G0 881 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 DDX20Q9UHI6 824 aaKnown RBP11.42□□□□□ -0.58
TNC-203ENST00000423613 TUBE1Q9UJT0 475 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 STMND1H3BQB6 276 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 VWA5AO00534 786 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 FOSL1P15407 271 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 GALK1P51570 392 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 BAATQ14032 418 aaPredicted RBP11.42□□□□□ -0.58
TNC-203ENST00000423613 TSNQ15631 228 aaKnown RBP11.42□□□□□ -0.58
TNC-203ENST00000423613 SLC7A14Q8TBB6 771 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 TEX13BQ9BXU2 312 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 SLC39A10Q9ULF5 831 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 GRID1Q9ULK0 1009 aa11.42□□□□□ -0.58
TNC-203ENST00000423613 A0A1W2PQ72 361 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 TRIM3O75382 744 aaPredicted RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 GRAP2O75791 330 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 NDUFB10O96000 172 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 COMTP21964 271 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 GMPSP49915 693 aaPredicted RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 PIGHQ14442 188 aaPredicted RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 COLEC11Q9BWP8 271 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 NUAK2Q9H093 628 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 RIBC2Q9H4K1 309 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 EFCAB1Q9HAE3 211 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 RXFP1Q9HBX9 757 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 A2ML1A8K2U0 1454 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 MROH7Q68CQ1 1323 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 DYRK3O43781 588 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 HS6ST1O60243 411 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 KHDRBS3O75525 346 aaKnown RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 TSPAN19P0C672 248 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 MBL2P11226 248 aaPredicted RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 PTPN7P35236 360 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 GEMIN4P57678 1058 aaKnown RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 PURAQ00577 322 aaKnown RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 PLA2G4FQ68DD2 849 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 ZNF438Q7Z4V0 828 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 TSPAN17Q96FV3 270 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 COPS4Q9BT78 406 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 FBXO28Q9NVF7 368 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 TMCC3Q9ULS5 477 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 SLC9A8Q9Y2E8 581 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 ABCC3O15438 1527 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 H7C0S8 307 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 EEF2KO00418 725 aaKnown RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 CLOCKO15516 846 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 KCNQ2O43526 872 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 CBFA2T3O75081 653 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 SNRPAP09012 282 aaKnown RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 LBPP18428 481 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 VAC14Q08AM6 782 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 DDX39BQ13838 428 aaKnown RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 FOXR1Q6PIV2 292 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 ARHGEF19Q8IW93 802 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 DEFB107AQ8IZN7 70 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 JADE3Q92613 823 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 PNKPQ96T60 521 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 RIC8BQ9NVN3 520 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 UBA2Q9UBT2 640 aaPredicted RBP11.41□□□□□ -0.58
TNC-203ENST00000423613 CCDC85CA6NKD9 419 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 SEC24AO95486 1093 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 GYPCP04921 128 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 ANTXR2P58335 489 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 EMC2Q15006 297 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 STILQ15468 1287 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 SBK1Q52WX2 424 aa11.41□□□□□ -0.58
TNC-203ENST00000423613 EIF3MQ7L2H7 374 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms