RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CERS4Q9HA82 394 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 NMUR1Q9HB89 426 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 CALCOCO1Q9P1Z2 691 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 USTQ9Y2C2 406 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 PRRC2BQ5JSZ5 2229 aaKnown RBP14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 A0A1W2PQH9 124 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 CTAGE15A4D2H0 777 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 ZNF840PA6NDX5 716 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 CCDC188H7C350 402 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 RFXAPO00287 272 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 PDE2AO00408 941 aaPredicted RBP14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 IRAK2O43187 625 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 CEP104O60308 925 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 SOAT2O75908 522 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 FGF19O95750 216 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 CTAGE8P0CG41 777 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 SLC2A3P11169 496 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 TFE3P19532 575 aaPredicted RBP14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 KDELR1P24390 212 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 HTR7P34969 479 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 CDKN2BP42772 138 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 SULT1E1P49888 294 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 EPHA5P54756 1037 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 NRG1Q02297 640 aaPredicted RBP14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 DEUP1Q05D60 604 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 RING1Q06587 406 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 TWF1Q12792 350 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 CYP1B1Q16678 543 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 TJAP1Q5JTD0 557 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 CCDC181Q5TID7 509 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 SDHAF4Q5VUM1 108 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 TXNRD3NBQ6F5E7 133 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 ELMSAN1Q6PJG2 1045 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 DNAJB7Q7Z6W7 309 aaPredicted RBP14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 CTAGE6Q86UF2 777 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 SLC13A5Q86YT5 568 aaPredicted RBP14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 CTAGE4Q8IX94 777 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 LEMD2Q8NC56 503 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 SPATA4Q8NEY3 305 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 SLC39A13Q96H72 371 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 HAPLN3Q96S86 360 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 PEBP4Q96S96 227 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 ZNF670Q9BS34 389 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 FRMD8P1Q9BZ68 369 aaPredicted RBP14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 HOMER3Q9NSC5 361 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 PIGVQ9NUD9 493 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 OSER1Q9NX31 292 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 ZDHHC7Q9NXF8 308 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 ARHGEF38Q9NXL2 777 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 GMIPQ9P107 970 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 THEGQ9P2T0 379 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 FZD10Q9ULW2 581 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 TLR6Q9Y2C9 796 aa14.84□□□□□ -0.03
SHMT1P1-201ENST00000419974 XIRP2A4UGR9 3374 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 CTIFO43310 598 aaKnown RBP14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 CLASP2O75122 1294 aaKnown RBP14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 IGLV3-27P01718 113 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 ADRA1BP35368 520 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 HCAR3P49019 387 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 KCNC3Q14003 757 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 CCDC85BQ15834 202 aaPredicted RBP14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 ARL13BQ3SXY8 428 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 TFDP3Q5H9I0 405 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 DAB2IPQ5VWQ8 1189 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 PLPP4Q5VZY2 271 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 SND1Q7KZF4 910 aaKnown RBP eCLIP14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 TAC4Q86UU9 113 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 MMGT1Q8N4V1 131 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 STKLD1Q8NE28 680 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 MYRIPQ8NFW9 859 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 SLC7A14Q8TBB6 771 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 RNF139Q8WU17 664 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 PPM1EQ8WY54 764 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 TSC1Q92574 1164 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 PSMB7Q99436 277 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 LRRC3Q9BY71 257 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 OSBPL8Q9BZF1 889 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 OSBPL2Q9H1P3 480 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 DDIT4Q9NX09 232 aa14.83□□□□□ -0.04
SHMT1P1-201ENST00000419974 KCNU1A8MYU2 1149 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 ZMYND10O75800 440 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 TJP3O95049 919 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 OLFM2O95897 454 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 FGGP02679 453 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 F11P03951 625 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 C8AP07357 584 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 RARGP13631 454 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 CCR1P32246 355 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 IRS1P35568 1242 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 PGFP49763 221 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 PITX1P78337 314 aaPredicted RBP14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 SEMA3BQ13214 749 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 MTMR3Q13615 1198 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 CDO1Q16878 200 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 ATP13A4Q4VNC1 1196 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 GLE1Q53GS7 698 aaKnown RBP14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 DRICH1Q6PGQ1 229 aaPredicted RBP14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 SPOCD1Q6ZMY3 1216 aa14.82□□□□□ -0.04
SHMT1P1-201ENST00000419974 RSRC2Q7L4I2 434 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms