RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 USP33Q8TEY7 942 aa13.31□□□□□ -0.28
HMGN1P4-201ENST00000419500 SHC3Q92529 594 aa13.31□□□□□ -0.28
HMGN1P4-201ENST00000419500 BHMTQ93088 406 aa13.31□□□□□ -0.28
HMGN1P4-201ENST00000419500 FAM149B1Q96BN6 582 aa13.31□□□□□ -0.28
HMGN1P4-201ENST00000419500 ANO10Q9NW15 660 aa13.31□□□□□ -0.28
HMGN1P4-201ENST00000419500 MARK1Q9P0L2 795 aa13.31□□□□□ -0.28
HMGN1P4-201ENST00000419500 HBS1LQ9Y450 684 aaKnown RBP13.31□□□□□ -0.28
HMGN1P4-201ENST00000419500 DMXL1Q9Y485 3027 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 CCDC163A0A0D9SF12 145 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 BECN2A8MW95 431 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 CACNG3O60359 315 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 CYBBP04839 570 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 TIE1P35590 1138 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 GPD2P43304 727 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 TNFRSF4P43489 277 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 PXNP49023 591 aaPredicted RBP13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 HARS2P49590 506 aaKnown RBP13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 DGKGP49619 791 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 PTK2Q05397 1052 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 MESP2Q0VG99 397 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 RAPGEF1Q13905 1077 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 SIM2Q14190 667 aaPredicted RBP13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 LPAL2Q16609 132 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 DENND1BQ6P3S1 775 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 DENND1CQ8IV53 801 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 FMNL3Q8IVF7 1028 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 SFTPA1Q8IWL2 248 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 TERB1Q8NA31 727 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 TSTD1Q8NFU3 115 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 CLEC4CQ8WTT0 213 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 STK32AQ8WU08 396 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 ZNF606Q8WXB4 792 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 TRIM62Q9BVG3 475 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 SIX2Q9NPC8 291 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 ACP6Q9NPH0 428 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 TAB2Q9NYJ8 693 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 SFMBT1Q9UHJ3 866 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 DNAJC12Q9UKB3 198 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 GMEB2Q9UKD1 530 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 AGO1Q9UL18 857 aaKnown RBP13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 MMP17Q9ULZ9 603 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 CEP83Q9Y592 693 aa13.3□□□□□ -0.28
HMGN1P4-201ENST00000419500 MSI1O43347 362 aaKnown RBP13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 KLF8O95600 359 aaPredicted RBP13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 KLKB1P03952 638 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 NCAM1P13591 858 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 MYL5Q02045 173 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 SRSF5Q13243 272 aaKnown RBP13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 PDCLQ13371 301 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 TRIP4Q15650 581 aaPredicted RBP13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 HSF5Q4G112 596 aaPredicted RBP13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 SMYD5Q6GMV2 418 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 MSANTD2Q6P1R3 559 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 C11orf57Q6ZUT1 292 aaPredicted RBP13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 TRMT11Q7Z4G4 463 aaKnown RBP13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 PASD1Q8IV76 773 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 PHTF2Q8N3S3 785 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 CCDC33Q8N5R6 958 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 ALLCQ8N6M5 410 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 ZNF513Q8N8E2 541 aaPredicted RBP13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 ANKRD20A12PQ8NF67 263 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 POLR3BQ9NW08 1133 aaPredicted RBP13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 PLK2Q9NYY3 685 aa13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 AJAP1Q9UKB5 411 aaPredicted RBP13.29□□□□□ -0.28
HMGN1P4-201ENST00000419500 E5RJQ4 531 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 CAPN9O14815 690 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 AXIN1O15169 862 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 RPP40O75818 363 aaKnown RBP13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 GABBR2O75899 941 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 ALDH1A2O94788 518 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 HOXC13P31276 330 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 KRT9P35527 623 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 DGKEP52429 567 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 EOGTQ5NDL2 527 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 FKBP15Q5T1M5 1219 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 CDKAL1Q5VV42 579 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 LAIR1Q6GTX8 287 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 SCUBE3Q8IX30 993 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 CPXM2Q8N436 756 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 IL17RCQ8NAC3 791 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 TXNDC5Q8NBS9 432 aaKnown RBP13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 DDI1Q8WTU0 396 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 GAB3Q8WWW8 586 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 NOX5Q96PH1 765 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 LSM14BQ9BX40 385 aaKnown RBP13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 VPS16Q9H269 839 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 PDCL3Q9H2J4 239 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 POLMQ9NP87 494 aaPredicted RBP13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 FHOD1Q9Y613 1164 aa13.28□□□□□ -0.28
HMGN1P4-201ENST00000419500 A0A0A0MRY4 1105 aa13.27□□□□□ -0.29
HMGN1P4-201ENST00000419500 TRIM24O15164 1050 aa13.27□□□□□ -0.29
HMGN1P4-201ENST00000419500 HRO43593 1189 aa13.27□□□□□ -0.29
HMGN1P4-201ENST00000419500 LATS1O95835 1130 aa13.27□□□□□ -0.29
HMGN1P4-201ENST00000419500 PENKP01210 267 aaPredicted RBP13.27□□□□□ -0.29
HMGN1P4-201ENST00000419500 PNMA6AP0CW24 399 aaPredicted RBP13.27□□□□□ -0.29
HMGN1P4-201ENST00000419500 KIR2DL1P43626 348 aaPredicted RBP13.27□□□□□ -0.29
HMGN1P4-201ENST00000419500 BPIFB4P59827 614 aa13.27□□□□□ -0.29
HMGN1P4-201ENST00000419500 ZNF445P59923 1031 aa13.27□□□□□ -0.29
HMGN1P4-201ENST00000419500 KRT31Q15323 416 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms