RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 MARCH9Q86YJ5 346 aa3.43□□□□□ -1.86
APP-207ENST00000415997 REXO1L1PQ8IX06 675 aa3.43□□□□□ -1.86
APP-207ENST00000415997 ZNF808Q8N4W9 903 aaPredicted RBP3.43□□□□□ -1.86
APP-207ENST00000415997 CAMKK1Q8N5S9 505 aa3.43□□□□□ -1.86
APP-207ENST00000415997 IL17DQ8TAD2 202 aa3.43□□□□□ -1.86
APP-207ENST00000415997 ITFG1Q8TB96 612 aa3.43□□□□□ -1.86
APP-207ENST00000415997 KCTD13Q8WZ19 329 aa3.43□□□□□ -1.86
APP-207ENST00000415997 ZBTB10Q96DT7 871 aa3.43□□□□□ -1.86
APP-207ENST00000415997 MSANTD3Q96H12 275 aa3.43□□□□□ -1.86
APP-207ENST00000415997 CAMK1GQ96NX5 476 aa3.43□□□□□ -1.86
APP-207ENST00000415997 TAAR1Q96RJ0 339 aa3.43□□□□□ -1.86
APP-207ENST00000415997 RPS6KC1Q96S38 1066 aa3.43□□□□□ -1.86
APP-207ENST00000415997 CDIP1Q9H305 208 aa3.43□□□□□ -1.86
APP-207ENST00000415997 ACBD3Q9H3P7 528 aa3.43□□□□□ -1.86
APP-207ENST00000415997 ZNF334Q9HCZ1 680 aaPredicted RBP3.43□□□□□ -1.86
APP-207ENST00000415997 STK39Q9UEW8 545 aa3.43□□□□□ -1.86
APP-207ENST00000415997 DSEQ9UL01 958 aa3.43□□□□□ -1.86
APP-207ENST00000415997 NOC2LQ9Y3T9 749 aaKnown RBP3.43□□□□□ -1.86
APP-207ENST00000415997 NUB1Q9Y5A7 615 aa3.43□□□□□ -1.86
APP-207ENST00000415997 CACNA1DQ01668 2161 aa3.43□□□□□ -1.86
APP-207ENST00000415997 TACC2O95359 2948 aa3.43□□□□□ -1.86
APP-207ENST00000415997 BAZ2AQ9UIF9 1905 aaKnown RBP3.42□□□□□ -1.86
APP-207ENST00000415997 GOLGA4Q13439 2230 aaKnown RBP3.42□□□□□ -1.86
APP-207ENST00000415997 CCDC168Q8NDH2 2452 aa3.42□□□□□ -1.86
APP-207ENST00000415997 DENND3A2RUS2 1198 aa3.42□□□□□ -1.86
APP-207ENST00000415997 BLACEA4D250 179 aa3.42□□□□□ -1.86
APP-207ENST00000415997 ZNF839A8K0R7 811 aa3.42□□□□□ -1.86
APP-207ENST00000415997 AGRPO00253 132 aa3.42□□□□□ -1.86
APP-207ENST00000415997 TGM5O43548 720 aa3.42□□□□□ -1.86
APP-207ENST00000415997 SH3BP5O60239 455 aa3.42□□□□□ -1.86
APP-207ENST00000415997 RECKO95980 971 aa3.42□□□□□ -1.86
APP-207ENST00000415997 SSBP05455 408 aaKnown RBP eCLIP3.42□□□□□ -1.86
APP-207ENST00000415997 KRT10P13645 584 aa3.42□□□□□ -1.86
APP-207ENST00000415997 CCNE1P24864 410 aa3.42□□□□□ -1.86
APP-207ENST00000415997 HOXA9P31269 272 aa3.42□□□□□ -1.86
APP-207ENST00000415997 CA8P35219 290 aa3.42□□□□□ -1.86
APP-207ENST00000415997 MSX2P35548 267 aaPredicted RBP3.42□□□□□ -1.86
APP-207ENST00000415997 ADCY8P40145 1251 aa3.42□□□□□ -1.86
APP-207ENST00000415997 CXADRP78310 365 aa3.42□□□□□ -1.86
APP-207ENST00000415997 NTHL1P78549 312 aa3.42□□□□□ -1.86
APP-207ENST00000415997 EXOSC9Q06265 439 aaKnown RBP3.42□□□□□ -1.86
APP-207ENST00000415997 PPFIA1Q13136 1202 aa3.42□□□□□ -1.86
APP-207ENST00000415997 G3BP1Q13283 466 aaKnown RBP eCLIP3.42□□□□□ -1.86
APP-207ENST00000415997 SLC14A1Q13336 389 aa3.42□□□□□ -1.86
APP-207ENST00000415997 TUBA3CQ13748 450 aa3.42□□□□□ -1.86
APP-207ENST00000415997 KARSQ15046 597 aaKnown RBP3.42□□□□□ -1.86
APP-207ENST00000415997 TESK1Q15569 626 aa3.42□□□□□ -1.86
APP-207ENST00000415997 SBK1Q52WX2 424 aa3.42□□□□□ -1.86
APP-207ENST00000415997 TNNI3KQ59H18 835 aa3.42□□□□□ -1.86
APP-207ENST00000415997 TRIM61Q5EBN2 209 aa3.42□□□□□ -1.86
APP-207ENST00000415997 CCDC158Q5M9N0 1113 aa3.42□□□□□ -1.86
APP-207ENST00000415997 TTC39AQ5SRH9 613 aa3.42□□□□□ -1.86
APP-207ENST00000415997 SLC35F1Q5T1Q4 408 aa3.42□□□□□ -1.86
APP-207ENST00000415997 SYDE2Q5VT97 1194 aa3.42□□□□□ -1.86
APP-207ENST00000415997 TUBA3EQ6PEY2 450 aa3.42□□□□□ -1.86
APP-207ENST00000415997 C1orf228Q6PIY5 440 aa3.42□□□□□ -1.86
APP-207ENST00000415997 GRASPQ7Z6J2 395 aaPredicted RBP3.42□□□□□ -1.86
APP-207ENST00000415997 ECHDC2Q86YB7 292 aa3.42□□□□□ -1.86
APP-207ENST00000415997 RSPH1Q8WYR4 309 aa3.42□□□□□ -1.86
APP-207ENST00000415997 TBC1D5Q92609 795 aa3.42□□□□□ -1.86
APP-207ENST00000415997 CLIP3Q96DZ5 547 aa3.42□□□□□ -1.86
APP-207ENST00000415997 TMEM176AQ96HP8 235 aa3.42□□□□□ -1.86
APP-207ENST00000415997 MBOAT7Q96N66 472 aa3.42□□□□□ -1.86
APP-207ENST00000415997 RMDN3Q96TC7 470 aa3.42□□□□□ -1.86
APP-207ENST00000415997 MRPL9Q9BYD2 267 aaKnown RBP3.42□□□□□ -1.86
APP-207ENST00000415997 CD244Q9BZW8 370 aa3.42□□□□□ -1.86
APP-207ENST00000415997 CAPN10Q9HC96 672 aa3.42□□□□□ -1.86
APP-207ENST00000415997 MRPL17Q9NRX2 175 aaKnown RBP3.42□□□□□ -1.86
APP-207ENST00000415997 GPR27Q9NS67 375 aa3.42□□□□□ -1.86
APP-207ENST00000415997 STARD5Q9NSY2 213 aa3.42□□□□□ -1.86
APP-207ENST00000415997 TMEM74BQ9NUR3 256 aa3.42□□□□□ -1.86
APP-207ENST00000415997 GDE1Q9NZC3 331 aa3.42□□□□□ -1.86
APP-207ENST00000415997 DBNLQ9UJU6 430 aaKnown RBP3.42□□□□□ -1.86
APP-207ENST00000415997 PNMA2Q9UL42 364 aa3.42□□□□□ -1.86
APP-207ENST00000415997 ZNF215Q9UL58 517 aaPredicted RBP3.42□□□□□ -1.86
APP-207ENST00000415997 STRIP2Q9ULQ0 834 aa3.42□□□□□ -1.86
APP-207ENST00000415997 ST3GAL5Q9UNP4 418 aa3.42□□□□□ -1.86
APP-207ENST00000415997 APOBEC2Q9Y235 224 aaKnown RBP3.42□□□□□ -1.86
APP-207ENST00000415997 FPGT-TNNI3KV9GXZ4 949 aa3.42□□□□□ -1.86
APP-207ENST00000415997 TNRC6BQ9UPQ9 1833 aaKnown RBP3.42□□□□□ -1.86
APP-207ENST00000415997 CCDC171Q6TFL3 1326 aa3.42□□□□□ -1.86
APP-207ENST00000415997 ZNF532Q9HCE3 1301 aa3.42□□□□□ -1.86
APP-207ENST00000415997 KNTC1P50748 2209 aa3.42□□□□□ -1.86
APP-207ENST00000415997 ABCA7Q8IZY2 2146 aa3.41□□□□□ -1.86
APP-207ENST00000415997 JMJD1CQ15652 2540 aa3.41□□□□□ -1.86
APP-207ENST00000415997 A0A0U1RQF3 1178 aa3.41□□□□□ -1.86
APP-207ENST00000415997 MYBPHLA2RUH7 354 aa3.41□□□□□ -1.86
APP-207ENST00000415997 B4E1Z4 1266 aa3.41□□□□□ -1.86
APP-207ENST00000415997 ACOT7O00154 380 aa3.41□□□□□ -1.86
APP-207ENST00000415997 RRP8O43159 456 aaKnown RBP3.41□□□□□ -1.86
APP-207ENST00000415997 OPHN1O60890 802 aa3.41□□□□□ -1.86
APP-207ENST00000415997 ATP9AO75110 1047 aa3.41□□□□□ -1.86
APP-207ENST00000415997 SOD2P04179 222 aa3.41□□□□□ -1.86
APP-207ENST00000415997 HNRNPA1P09651 372 aaKnown RBP eCLIP3.41□□□□□ -1.86
APP-207ENST00000415997 SPATA31D3P0C874 917 aa3.41□□□□□ -1.86
APP-207ENST00000415997 UBTFL1P0CB47 393 aaPredicted RBP3.41□□□□□ -1.86
APP-207ENST00000415997 MYF5P13349 255 aa3.41□□□□□ -1.86
APP-207ENST00000415997 HLA-EP13747 358 aa3.41□□□□□ -1.86
APP-207ENST00000415997 ITGB6P18564 788 aa3.41□□□□□ -1.86
APP-207ENST00000415997 RPL17P18621 184 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms