RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SNX30Q5VWJ9 437 aa14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 LEMD2Q8NC56 503 aa14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 ZSCAN18Q8TBC5 510 aaPredicted RBP14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 SUSD6Q92537 303 aa14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 DDX23Q9BUQ8 820 aaKnown RBP14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 TASP1Q9H6P5 420 aa14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 TMPRSS4Q9NRS4 437 aa14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 ASNSD1Q9NWL6 643 aa14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 DDIT4Q9NX09 232 aa14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 CLIC5Q9NZA1 410 aa14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 MARCH2Q9P0N8 246 aa14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 CPQQ9Y646 472 aa14.72□□□□□ -0.05
CHRNA1-204ENST00000409323 HELZP42694 1942 aaKnown RBP14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 TRAV19A0A0A6YYK7 116 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 FGF19O95750 216 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 IL9P15248 144 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 TCF4P15884 667 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 SDC4P31431 198 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 NOS2P35228 1153 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 SCNN1AP37088 669 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 VIPR2P41587 438 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 PPP3CCP48454 512 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 KCNQ1P51787 676 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 SMAD4Q13485 552 aaKnown RBP14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 CMTM8Q8IZV2 173 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 RIN3Q8TB24 985 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 KIAA1524Q8TCG1 905 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 FAM172AQ8WUF8 416 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 NPY6RQ99463 290 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 IRX2Q9BZI1 471 aaPredicted RBP14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 KCND1Q9NSA2 647 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 DNMT3LQ9UJW3 386 aa14.71□□□□□ -0.05
CHRNA1-204ENST00000409323 UNC80Q8N2C7 3258 aa14.71□□□□□ -0.06
CHRNA1-204ENST00000409323 PJA2O43164 708 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 TNNT1P13805 278 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 GJC1P36383 396 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 AVPR1AP37288 418 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 FAM78AQ5JUQ0 283 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 PTCRAQ6ISU1 281 aaPredicted RBP14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 FAM131BQ86XD5 332 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 ARID3BQ8IVW6 561 aaPredicted RBP14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 REXO1L1PQ8IX06 675 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 RHOT2Q8IXI1 618 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 RPGRIP1Q96KN7 1286 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 ZFRQ96KR1 1074 aaKnown RBP14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 SMOC2Q9H3U7 446 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 PIGVQ9NUD9 493 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 UVRAGQ9P2Y5 699 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 STAP1Q9ULZ2 295 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 CAPN6Q9Y6Q1 641 aa14.7□□□□□ -0.06
CHRNA1-204ENST00000409323 MYO1FO00160 1098 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 BUB1BO60566 1050 aaPredicted RBP14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 MOCS2O96007 188 aaPredicted RBP14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 GGCXP38435 758 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 SSR1P43307 286 aaKnown RBP14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 ZNF143P52747 638 aaPredicted RBP14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 DEUP1Q05D60 604 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 SLC25A52Q3SY17 297 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 ARHGAP29Q52LW3 1261 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 ZC3H12AQ5D1E8 599 aaKnown RBP14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 MSANTD2Q6P1R3 559 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 SCYL2Q6P3W7 929 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 ARFGAP1Q8N6T3 406 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 ADAMTS19Q8TE59 1207 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 USP13Q92995 863 aaPredicted RBP14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 RNF34Q969K3 372 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 RSPRY1Q96DX4 576 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 MAGEB5Q9BZ81 275 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 ANLNQ9NQW6 1124 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 PCSK1NQ9UHG2 260 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 XPO7Q9UIA9 1087 aaKnown RBP14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 CDH7Q9ULB5 785 aa14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 NUP210Q8TEM1 1887 aaPredicted RBP14.69□□□□□ -0.06
CHRNA1-204ENST00000409323 IRAK2O43187 625 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 OLFM2O95897 454 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 TUBP50607 506 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 HDAC4P56524 1084 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 TBX4P57082 545 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 LEXMQ3ZCV2 418 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 CCAR2Q8N163 923 aaKnown RBP14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 TPCN2Q8NHX9 752 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 SH3RF2Q8TEC5 729 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 ACSF2Q96CM8 615 aaPredicted RBP14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 KXD1Q9BQD3 176 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 CNPY3Q9BT09 278 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 KLF16Q9BXK1 252 aaPredicted RBP14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 OLA1Q9NTK5 396 aaKnown RBP14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 CFAP97Q9P2B7 532 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 SNX10Q9Y5X0 201 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 TCF20Q9UGU0 1960 aaKnown RBP14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 A0A0A6YYK5 440 aaPredicted RBP14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 GRID2IPA4D2P6 1211 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 C2CD4DB7Z1M9 353 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 LEFTY2O00292 366 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 DPYSL4O14531 572 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 KRT86O43790 486 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 IGLV3-25P01717 112 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 PTPN9P43378 593 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 SMTNL2Q2TAL5 461 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms