RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PCDHGA2Q9Y5H1 932 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 SDK1Q7Z5N4 2213 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 PLXND1Q9Y4D7 1925 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 DMDP11532 3685 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 SLC12A8A0AV02 714 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 LGALS16A8MUM7 142 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 E5RJQ4 531 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 PES1O00541 588 aaKnown RBP17.46■□□□□ 0.39
APTR-201ENST00000398043 EPHB6O15197 1021 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 CACNG3O60359 315 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 TULP3O75386 442 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 CORO1AP31146 461 aaKnown RBP17.46■□□□□ 0.39
APTR-201ENST00000398043 PDCLQ13371 301 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 BEND5Q7L4P6 421 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 ASCL5Q7RTU5 278 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 FMNL3Q8IVF7 1028 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 DHX40Q8IX18 779 aaKnown RBP17.46■□□□□ 0.39
APTR-201ENST00000398043 AOPEPQ8N6M6 819 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 USP33Q8TEY7 942 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 DDX1Q92499 740 aaKnown RBP17.46■□□□□ 0.39
APTR-201ENST00000398043 PLD4Q96BZ4 506 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 CPXM1Q96SM3 734 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 PNKPQ96T60 521 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 STK33Q9BYT3 514 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 DCLK3Q9C098 648 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 MIS12Q9H081 205 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 STRIP2Q9ULQ0 834 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 ZNF510Q9Y2H8 683 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 HBS1LQ9Y450 684 aaKnown RBP17.46■□□□□ 0.39
APTR-201ENST00000398043 WDR87Q6ZQQ6 2873 aa17.46■□□□□ 0.39
APTR-201ENST00000398043 GVINP1Q7Z2Y8 2422 aa17.46■□□□□ 0.38
APTR-201ENST00000398043 PRR23AA6NEV1 266 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 F8VZ95 297 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 GFRA2O00451 464 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 KAT7O95251 611 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 HMBSP08397 361 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 ATP1A3P13637 1013 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 CDH5P33151 784 aaPredicted RBP17.45■□□□□ 0.38
APTR-201ENST00000398043 JAM2P57087 298 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 DMWDQ09019 674 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 RAPGEF1Q13905 1077 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 CPXM2Q8N436 756 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 PIWIL1Q96J94 861 aaKnown RBP17.45■□□□□ 0.38
APTR-201ENST00000398043 SEMA4AQ9H3S1 761 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 ST7Q9NRC1 585 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 POLR3BQ9NW08 1133 aaPredicted RBP17.45■□□□□ 0.38
APTR-201ENST00000398043 STOML2Q9UJZ1 356 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 FBXO10Q9UK96 956 aa17.45■□□□□ 0.38
APTR-201ENST00000398043 ABCA7Q8IZY2 2146 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 CKAP5Q14008 2032 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 TRIM24O15164 1050 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 MSI1O43347 362 aaKnown RBP17.44■□□□□ 0.38
APTR-201ENST00000398043 ATG13O75143 517 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 PENKP01210 267 aaPredicted RBP17.44■□□□□ 0.38
APTR-201ENST00000398043 CISD3P0C7P0 127 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 TYRP14679 529 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 CYP11B1P15538 503 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 GRIA2P42262 883 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 KIR2DL1P43626 348 aaPredicted RBP17.44■□□□□ 0.38
APTR-201ENST00000398043 BPIFB4P59827 614 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 ANO4Q32M45 955 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 FYB2Q5VWT5 728 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 ZC3H14Q6PJT7 736 aaKnown RBP17.44■□□□□ 0.38
APTR-201ENST00000398043 TPGS1Q6ZTW0 290 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 SYT13Q7L8C5 426 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 DENND1CQ8IV53 801 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 NAT16Q8N8M0 369 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 SUMF1Q8NBK3 374 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 RPLP0P6Q8NHW5 317 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 RNF139Q8WU17 664 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 NKD2Q969F2 451 aaPredicted RBP17.44■□□□□ 0.38
APTR-201ENST00000398043 ERGIC2Q96RQ1 377 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 BBS2Q9BXC9 721 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 WDR35Q9P2L0 1181 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 HCN2Q9UL51 889 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 CEP192Q8TEP8 1941 aa17.44■□□□□ 0.38
APTR-201ENST00000398043 ZNF292O60281 2723 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.43■□□□□ 0.38
APTR-201ENST00000398043 NEDD8-MDP1E9PL57 170 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 SART1O43290 800 aaKnown RBP17.43■□□□□ 0.38
APTR-201ENST00000398043 CHKAP35790 457 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 TNFRSF4P43489 277 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 NRLP54845 237 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 EIF4EBP2Q13542 120 aaPredicted RBP17.43■□□□□ 0.38
APTR-201ENST00000398043 PPP2R5DQ14738 602 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 IQCB1Q15051 598 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 FKBP15Q5T1M5 1219 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 SYPL2Q5VXT5 272 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 PASD1Q8IV76 773 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 C1orf131Q8NDD1 294 aaKnown RBP17.43■□□□□ 0.38
APTR-201ENST00000398043 DQX1Q8TE96 717 aaKnown RBP17.43■□□□□ 0.38
APTR-201ENST00000398043 NAT10Q9H0A0 1025 aaKnown RBP17.43■□□□□ 0.38
APTR-201ENST00000398043 ARHGEF4Q9NR80 690 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 FAM207AQ9NSI2 230 aaPredicted RBP17.43■□□□□ 0.38
APTR-201ENST00000398043 NAALADL1Q9UQQ1 740 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 DAAM1Q9Y4D1 1078 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 FRYLO94915 3013 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 NUP205Q92621 2012 aa17.43■□□□□ 0.38
APTR-201ENST00000398043 DOCK4Q8N1I0 1966 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 LATS1O95835 1130 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms