RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 BHLHA9Q7RTU4 235 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 TMEM25Q86YD3 366 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 STK32AQ8WU08 396 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 ZNF606Q8WXB4 792 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 GOLGA1Q92805 767 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 RRAGDQ9NQL2 400 aaPredicted RBP15.24■□□□□ 0.03
SEC13-208ENST00000397109 SLC8A2Q9UPR5 921 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.24■□□□□ 0.031e-11■□□□□ 8.3
SEC13-208ENST00000397109 EP300Q09472 2414 aaPredicted RBP15.23■□□□□ 0.03
SEC13-208ENST00000397109 A0A0A0MRY4 1105 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 SLC12A8A0AV02 714 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 YJEFN3A6XGL0 299 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 E7ENQ6 273 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 SART1O43290 800 aaKnown RBP15.23■□□□□ 0.03
SEC13-208ENST00000397109 SERPINC1P01008 464 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 CALCAP01258 141 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 CDK11BP21127 795 aaKnown RBP15.23■□□□□ 0.03
SEC13-208ENST00000397109 CNR2P34972 360 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 GRIA2P42262 883 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 GPD2P43304 727 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 COPB1P53618 953 aaKnown RBP15.23■□□□□ 0.03
SEC13-208ENST00000397109 PTK2Q05397 1052 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 RPLP0P6Q8NHW5 317 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 NDRG1Q92597 394 aaKnown RBP15.23■□□□□ 0.03
SEC13-208ENST00000397109 PLD4Q96BZ4 506 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 XPO6Q96QU8 1125 aaKnown RBP15.23■□□□□ 0.03
SEC13-208ENST00000397109 SIX2Q9NPC8 291 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 ARHGEF4Q9NR80 690 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 TAB2Q9NYJ8 693 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 MARK1Q9P0L2 795 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 DEC1Q9P2X7 70 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 DNAJC12Q9UKB3 198 aa15.23■□□□□ 0.03
SEC13-208ENST00000397109 HBS1LQ9Y450 684 aaKnown RBP15.23■□□□□ 0.03
SEC13-208ENST00000397109 CCDC163A0A0D9SF12 145 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 LGALS16A8MUM7 142 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 K7EQS6 105 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 KAT7O95251 611 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 CHKAP35790 457 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 TNFRSF4P43489 277 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 SLC6A11P48066 632 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 RPL34P49207 117 aaKnown RBP15.22■□□□□ 0.03
SEC13-208ENST00000397109 MRPS21P82921 87 aaKnown RBP15.22■□□□□ 0.03
SEC13-208ENST00000397109 HSF5Q4G112 596 aaPredicted RBP15.22■□□□□ 0.03
SEC13-208ENST00000397109 PKN3Q6P5Z2 889 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 SYT13Q7L8C5 426 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 LONP2Q86WA8 852 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 ETFBKMTQ8IXQ9 262 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 CAMKK1Q8N5S9 505 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 SPC24Q8NBT2 197 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 USP33Q8TEY7 942 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 EZH1Q92800 747 aaPredicted RBP15.22■□□□□ 0.03
SEC13-208ENST00000397109 BBS2Q9BXC9 721 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 XPO4Q9C0E2 1151 aaKnown RBP15.22■□□□□ 0.03
SEC13-208ENST00000397109 EPC1Q9H2F5 836 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 ST7Q9NRC1 585 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 IFNKQ9P0W0 207 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 VPS13AQ96RL7 3174 aa15.22■□□□□ 0.03
SEC13-208ENST00000397109 MYO18AQ92614 2054 aaKnown RBP15.22■□□□□ 0.03
SEC13-208ENST00000397109 A0A1B0GTH6 734 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 NRDCO43847 1150 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 TULP3O75386 442 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 GABBR2O75899 941 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 LTFP02788 710 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 HMBSP08397 361 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 CORO1AP31146 461 aaKnown RBP15.21■□□□□ 0.03
SEC13-208ENST00000397109 FNTBP49356 437 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 BPIFB4P59827 614 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 APBA1Q02410 837 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 TRIP4Q15650 581 aaPredicted RBP15.21■□□□□ 0.03
SEC13-208ENST00000397109 MSANTD2Q6P1R3 559 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 DENND1BQ6P3S1 775 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 TPGS1Q6ZTW0 290 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 WDR5BQ86VZ2 330 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 C12orf40Q86WS4 652 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 FMNL3Q8IVF7 1028 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 NAT16Q8N8M0 369 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 EDEM1Q92611 657 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 TRIM62Q9BVG3 475 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 SLC4A5Q9BY07 1137 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 C2orf42Q9NWW7 574 aa15.21■□□□□ 0.03
SEC13-208ENST00000397109 OTOGLQ3ZCN5 2332 aa15.21■□□□□ 0.02
SEC13-208ENST00000397109 TBC1D3BA6NDS4 549 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 NEDD8-MDP1E9PL57 170 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 FOXN3O00409 490 aaPredicted RBP15.2■□□□□ 0.02
SEC13-208ENST00000397109 CACNG3O60359 315 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 KLKB1P03952 638 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 TYRP14679 529 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 HARS2P49590 506 aaKnown RBP15.2■□□□□ 0.02
SEC13-208ENST00000397109 KCNMA1Q12791 1236 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 DMC1Q14565 340 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 KLHDC7AQ5VTJ3 777 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 LRRC8AQ8IWT6 810 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 PHTF2Q8N3S3 785 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 SUMF1Q8NBK3 374 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 KCNV2Q8TDN2 545 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 MIS12Q9H081 205 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 VPS16Q9H269 839 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 RTN4Q9NQC3 1192 aaKnown RBP15.2■□□□□ 0.02
SEC13-208ENST00000397109 AGO1Q9UL18 857 aaKnown RBP15.2■□□□□ 0.02
SEC13-208ENST00000397109 RAB23Q9ULC3 237 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms