RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 FLT3P36888 993 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 CCR2P41597 374 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 ZNF143P52747 638 aaPredicted RBP14.16□□□□□ -0.14
PTN-202ENST00000393083 RPL10AP62906 217 aaKnown RBP14.16□□□□□ -0.14
PTN-202ENST00000393083 CCDC70Q6NSX1 233 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 TRNP1Q6NT89 227 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 SLC26A9Q7LBE3 791 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 SCN4BQ8IWT1 228 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 KATNAL2Q8IYT4 538 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 SIX6OS1Q8N1H7 587 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 ZMIZ2Q8NF64 920 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 ITFG1Q8TB96 612 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 SPATA17Q96L03 361 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 C8orf48Q96LL4 319 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 NECAB3Q96P71 396 aaPredicted RBP14.16□□□□□ -0.14
PTN-202ENST00000393083 AP1M1Q9BXS5 423 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 ZNF334Q9HCZ1 680 aaPredicted RBP14.16□□□□□ -0.14
PTN-202ENST00000393083 ASNSD1Q9NWL6 643 aa14.16□□□□□ -0.14
PTN-202ENST00000393083 KRIT1O00522 736 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 MOSPD3O75425 235 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 LRCH4O75427 683 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 KRT1P04264 644 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 PDGFRAP16234 1089 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 DESP17661 470 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 GRIK1P39086 918 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 MTMR3Q13615 1198 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 VEPH1Q14D04 833 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 ACAP1Q15027 740 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 TAF5Q15542 800 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 HADHQ16836 314 aaKnown RBP14.15□□□□□ -0.14
PTN-202ENST00000393083 ZFYVE27Q5T4F4 411 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 LRRC38Q5VT99 294 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 ITIH5Q86UX2 942 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 CCDC50Q8IVM0 306 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 LEMD2Q8NC56 503 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 STKLD1Q8NE28 680 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 ANKRD7Q92527 254 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 TCEAL4Q96EI5 215 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 CEP295NLQ96MC4 621 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 MYADMQ96S97 322 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 CNPY3Q9BT09 278 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 ANKZF1Q9H8Y5 726 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 CD320Q9NPF0 282 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 DMAP1Q9NPF5 467 aaPredicted RBP14.15□□□□□ -0.14
PTN-202ENST00000393083 ASAH2Q9NR71 780 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 KLHL11Q9NVR0 708 aa14.15□□□□□ -0.14
PTN-202ENST00000393083 ZNF638Q14966 1978 aaKnown RBP14.15□□□□□ -0.14
PTN-202ENST00000393083 GREB1Q4ZG55 1949 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 GOLGA6L10A0A0M3HER8 536 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 SLC38A8A6NNN8 435 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 C2CD4DB7Z1M9 353 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 CCDC188H7C350 402 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 TRIM66O15016 1216 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 RNF8O76064 485 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 SDC4P31431 198 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 TKTL1P51854 596 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 SLC25A11Q02978 314 aaKnown RBP14.14□□□□□ -0.15
PTN-202ENST00000393083 CDO1Q16878 200 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 C8orf74Q6P047 294 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 PDZD4Q76G19 769 aaPredicted RBP14.14□□□□□ -0.15
PTN-202ENST00000393083 GPRIN1Q7Z2K8 1008 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 ADAT2Q7Z6V5 191 aaKnown RBP14.14□□□□□ -0.15
PTN-202ENST00000393083 SLC13A5Q86YT5 568 aaPredicted RBP14.14□□□□□ -0.15
PTN-202ENST00000393083 EXD1Q8NHP7 514 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 KHSRPQ92945 711 aaKnown RBP eCLIP14.14□□□□□ -0.15
PTN-202ENST00000393083 MYRFLQ96LU7 910 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 CFAP57Q96MR6 1250 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 KCNK16Q96T55 309 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 KRT12Q99456 494 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 IL21Q9HBE4 155 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 CSNK1G1Q9HCP0 422 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 DDX56Q9NY93 547 aaKnown RBP14.14□□□□□ -0.15
PTN-202ENST00000393083 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.14□□□□□ -0.15
PTN-202ENST00000393083 MRPS23Q9Y3D9 190 aaKnown RBP14.14□□□□□ -0.15
PTN-202ENST00000393083 NR2E1Q9Y466 385 aa14.14□□□□□ -0.15
PTN-202ENST00000393083 HHLA1C9JL84 531 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 HSF2BPO75031 334 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 DAB1O75553 588 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 FBXO21O94952 628 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 CSH1P0DML2 217 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 CSH2P0DML3 217 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 MYL4P12829 197 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 SP100P23497 879 aaPredicted RBP14.13□□□□□ -0.15
PTN-202ENST00000393083 C15orf59Q2T9L4 293 aaPredicted RBP14.13□□□□□ -0.15
PTN-202ENST00000393083 CCDC14Q49A88 953 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 EFHC1Q5JVL4 640 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 GAREM2Q75VX8 874 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 GET4Q7L5D6 327 aaPredicted RBP14.13□□□□□ -0.15
PTN-202ENST00000393083 OTOP3Q7RTS5 596 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 POLNQ7Z5Q5 900 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 TMEM150AQ86TG1 271 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 KLHL7Q8IXQ5 586 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 ARFGAP1Q8N6T3 406 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 FGF13Q92913 245 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 FAM149B1Q96BN6 582 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 TRMT2BQ96GJ1 504 aaKnown RBP14.13□□□□□ -0.15
PTN-202ENST00000393083 RBM41Q96IZ5 413 aaKnown RBP14.13□□□□□ -0.15
PTN-202ENST00000393083 UHRF1Q96T88 793 aaPredicted RBP14.13□□□□□ -0.15
PTN-202ENST00000393083 ULBP1Q9BZM6 244 aa14.13□□□□□ -0.15
PTN-202ENST00000393083 UBXN6Q9BZV1 441 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms