RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 TNFRSF8P28908 595 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 MAGEA11P43364 429 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 PPIGQ13427 754 aaKnown RBP eCLIP12.68□□□□□ -0.382e-8■□□□□ 8.8
SPTBN1-203ENST00000389980 PDK2Q15119 407 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 ANKRD20A8PQ5CZ79 823 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 TAC4Q86UU9 113 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 MAP7D3Q8IWC1 876 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 ATL2Q8NHH9 583 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 PCDH19Q8TAB3 1148 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 GIPC2Q8TF65 315 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 PIK3R5Q8WYR1 880 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 C8orf48Q96LL4 319 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 RNF157Q96PX1 679 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 NCAPGQ9BPX3 1015 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 CLSTN3Q9BQT9 956 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.68□□□□□ -0.387e-11■■□□□ 11.9
SPTBN1-203ENST00000389980 RASAL2Q9UJF2 1139 aa12.68□□□□□ -0.38
SPTBN1-203ENST00000389980 GJB5O95377 273 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 CAPN2P17655 700 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 LAG3P18627 525 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 RPL21P46778 160 aaKnown RBP12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 VPS41P49754 854 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 GYS2P54840 703 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 BYSLQ13895 437 aaKnown RBP12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 DPYSL2Q16555 572 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 TMEM240Q5SV17 173 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 BTBD8Q5XKL5 378 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 SLC8B1Q6J4K2 584 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 C1orf228Q6PIY5 440 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 SND1Q7KZF4 910 aaKnown RBP eCLIP12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 SCML4Q8N228 414 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 PQLC3Q8N755 202 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 GLIS1Q8NBF1 620 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 SPPL2BQ8TCT7 592 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 DQX1Q8TE96 717 aaKnown RBP12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 LRRN4Q8WUT4 740 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 SEC14L1Q92503 715 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 ZBED2Q9BTP6 218 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 RAB17Q9H0T7 212 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 HOMER3Q9NSC5 361 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 SPG21Q9NZD8 308 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 SFMBT1Q9UHJ3 866 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 ZMYND8Q9ULU4 1186 aaPredicted RBP12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 ZNF148Q9UQR1 794 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 EFR3BQ9Y2G0 817 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 PLXNA3P51805 1871 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 HAPLN1P10915 354 aaPredicted RBP12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 ETS1P14921 441 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 GOT1P17174 413 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 GLUD2P49448 558 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 MAP9Q49MG5 647 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 DENND5BQ6ZUT9 1274 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 GSTA5Q7RTV2 222 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 VPS52Q8N1B4 723 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 TMEM121Q9BTD3 319 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 CWC15Q9P013 229 aaKnown RBP12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 GMIPQ9P107 970 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 MFHAS1Q9Y4C4 1052 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 SNX10Q9Y5X0 201 aa12.67□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM72CH0Y354 149 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 MSI1O43347 362 aaKnown RBP12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 CSPG5O95196 566 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 ATF6P18850 670 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 GGCXP38435 758 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 CUL1Q13616 776 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 OASLQ15646 514 aaKnown RBP12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM72AQ5TYM5 149 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM72DQ6L9T8 149 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM72BQ86X60 149 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 CCDC33Q8N5R6 958 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 PLD5Q8N7P1 536 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 SLC35B2Q8TB61 432 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM71BQ8TC56 605 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 CASP10Q92851 521 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 SLCO2A1Q92959 643 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 RUNDC3BQ96NL0 473 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 GRHL1Q9NZI5 618 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 HEY1Q9Y5J3 304 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 BACE2Q9Y5Z0 518 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 COL4A4P53420 1690 aaPredicted RBP12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 APOC4-APOC2K7ER74 178 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 CREB3O43889 395 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 SEC24AO95486 1093 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 APOC2P02655 101 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 LINC00271P0C7V0 271 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 ZSCAN5DPP0CG00 497 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 AMPD1P23109 780 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 ADRA1BP35368 520 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 PLTPP55058 493 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 VCPP55072 806 aaKnown RBP12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 DSG1Q02413 1049 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 GPS2Q13227 327 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 ZC3H18Q86VM9 953 aaKnown RBP12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 NETO2Q8NC67 525 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 GRK7Q8WTQ7 553 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 CSPG4P5Q96PW8 444 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 ZNF670Q9BS34 389 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 FAM114A2Q9NRY5 505 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms