RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 MAPK10P53779 464 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 TAF12Q16514 161 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 RNASEH2BQ5TBB1 312 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 HPS6Q86YV9 775 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 BHLHE22Q8NFJ8 381 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 IPMKQ8NFU5 416 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 GIPC2Q8TF65 315 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 WDR60Q8WVS4 1066 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 CHST12Q9NRB3 414 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 TRIM13O60858 407 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 LINGO3P0C6S8 592 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 CXCL8P10145 99 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 EIF4BP23588 611 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 RTP1P59025 263 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 UGP2Q16851 508 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 AGKQ53H12 422 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 KYAT3Q6YP21 454 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 TTLL6Q8N841 843 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 TMEM176AQ96HP8 235 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 MARK4Q96L34 752 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 ETNK2Q9NVF9 386 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 PNPOQ9NVS9 261 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 AP4E1Q9UPM8 1137 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 LRRC37A3O60309 1634 aa13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 A0A096LPK6 155 aa13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 MTA2O94776 668 aa13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 ERVK-10P10266 1014 aa13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 UQCRBP14927 111 aa13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 ATP1A4Q13733 1029 aa13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 KCNT2Q6UVM3 1135 aa13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 PTAR1Q7Z6K3 402 aaPredicted RBP13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 ZBTB46Q86UZ6 589 aa13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 RMND5BQ96G75 393 aaPredicted RBP13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 RABGEF1Q9UJ41 708 aa13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 LRRC42Q9Y546 428 aa13.52□□□□□ -0.24
TRAPPC9-201ENST00000389328 TRDMT1O14717 391 aaKnown RBP13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 RTN3O95197 1032 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 SUPT20HL2P0C7V6 817 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 FDX1P10109 184 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 MPP3Q13368 585 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 STILQ15468 1287 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 SUPT20HL1Q3ZLR7 823 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 PLEKHA7Q6IQ23 1121 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 ADGRD1Q6QNK2 874 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 TNS4Q8IZW8 715 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 PCDH20Q8N6Y1 951 aaKnown RBP13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 JOSD2Q8TAC2 188 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 SKA2Q8WVK7 121 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 PIDD1Q9HB75 910 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 S100A14Q9HCY8 104 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 ATXN10Q9UBB4 475 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 MYH6P13533 1939 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 C15orf38-AP3S2A0A0A6YYH1 394 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 M0QZ92 97 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 MGEA5O60502 916 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 VDRP11473 427 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 GP5P40197 560 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 MMP14P50281 582 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 USP4Q13107 963 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 PEX6Q13608 980 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 PTF1AQ7RTS3 328 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 KRT27Q7Z3Y8 459 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 ARPINQ7Z6K5 226 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 HACE1Q8IYU2 909 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 RTKN2Q8IZC4 609 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 BEGAINQ9BUH8 593 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 EBF3Q9H4W6 596 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 ARHGEF38Q9NXL2 777 aa13.52□□□□□ -0.25
TRAPPC9-201ENST00000389328 KCNK1O00180 336 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 COX4I1P13073 169 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 TPH1P17752 444 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 VCLP18206 1134 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 NEK3P51956 506 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 MED1Q15648 1581 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 GLRA4Q5JXX5 417 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 IER5Q5VY09 327 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SCUBE3Q8IX30 993 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SLC44A1Q8WWI5 657 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 APBB2Q92870 758 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 NAT9Q9BTE0 207 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 QTRT2Q9H974 415 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 LRRC40Q9H9A6 602 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 COL1A1P02452 1464 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 UBA6A0AVT1 1052 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SPDYE16A6NNV3 312 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 CCNFP41002 786 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 CDK7P50613 346 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SPIRE1Q08AE8 756 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 PCSK7Q16549 785 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 TRIM16LQ309B1 348 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 TDRPQ86YL5 185 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SERAC1Q96JX3 654 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 ZMAT2Q96NC0 199 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 PLEKHA5Q9HAU0 1116 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 GGA3Q9NZ52 723 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SIGLEC16A6NMB1 481 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 TCEA3O75764 348 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms