RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 SMCR8Q8TEV9 937 aaPredicted RBP3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PIGKQ92643 395 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PRR11Q96HE9 360 aaPredicted RBP3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TMEM204Q9BSN7 226 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CINPQ9BW66 212 aaPredicted RBP3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TMEM60Q9H2L4 133 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 FAM83DQ9H4H8 585 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 VPS45Q9NRW7 570 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 DECR2Q9NUI1 292 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 DNAJB11Q9UBS4 358 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 DKK4Q9UBT3 224 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ICKQ9UPZ9 632 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 A0A0G2JK05 382 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 EME2A4GXA9 379 aaPredicted RBP3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ISM1B1AKI9 464 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 F8W810 466 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 FRS3O43559 492 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CTNND1O60716 968 aaKnown RBP3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SNX2O60749 519 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 IGSF3O75054 1194 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TMEM225BP0DP42 221 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TXNP10599 105 aaKnown RBP3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 HOXB2P14652 356 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ZKSCAN1P17029 563 aaPredicted RBP3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 YY1P25490 414 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CDC25AP30304 524 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 IDUAP35475 653 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SLC12A2P55011 1212 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 HYAL1Q12794 435 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MTA1Q13330 715 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CNGA2Q16280 664 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PTPROQ16827 1216 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PLAG1Q6DJT9 500 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 P3H2Q8IVL5 708 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 YAF2Q8IY57 180 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 KIAA0319LQ8IZA0 1049 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TMEM199Q8N511 208 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 BCAS4Q8TDM0 211 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 RUNDC1Q96C34 613 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 GPATCH3Q96I76 525 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SELENOOQ9BVL4 669 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CHST8Q9H2A9 424 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SAP30LQ9HAJ7 183 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 COL20A1Q9P218 1284 aa3.04□□□□□ -1.92
RNU6-1040P-201ENST00000383974 COL15A1P39059 1388 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TRBV5-3A0A0A0MS03 114 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 KRT86O43790 486 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MT3P25713 68 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TNFRSF8P28908 595 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ARRB2P32121 409 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PGGT1BP53609 377 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 DNASE1L3Q13609 305 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 KRT81Q14533 505 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 INPP5JQ15735 1006 aaPredicted RBP3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ZNF628Q5EBL2 1059 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MANEALQ5VSG8 457 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 NUGGCQ68CJ6 796 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 FSTL5Q8N475 847 aaPredicted RBP3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SLC44A5Q8NCS7 719 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MIB2Q96AX9 1013 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MSI2Q96DH6 328 aaKnown RBP3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 P2RY11Q96G91 374 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ZDHHC12Q96GR4 267 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TUBB6Q9BUF5 446 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 BRINP2Q9C0B6 783 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ZCWPW1Q9H0M4 648 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CDH19Q9H159 772 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MOV10Q9HCE1 1003 aaKnown RBP3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PAPOLBQ9NRJ5 636 aaKnown RBP3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SELENONQ9NZV5 590 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ITGB1BP2Q9UKP3 347 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TPCN1Q9ULQ1 816 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 HPSEQ9Y251 543 aa3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TCF20Q9UGU0 1960 aaKnown RBP3.03□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PRPF3O43395 683 aaKnown RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 UGDHO60701 494 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ZC3H11AO75152 810 aaKnown RBP eCLIP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 USP12O75317 370 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 RFPL1O75677 317 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 WDR47O94967 919 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 INMTO95050 263 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 CARSP49589 748 aaKnown RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 VPS41P49754 854 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 RGS19P49795 217 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 P2RX3P56373 397 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 MTAPQ13126 283 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 PTGR1Q14914 329 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 CNGA3Q16281 694 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ASIC2Q16515 512 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 AASDHQ4L235 1098 aaPredicted RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ZNF324BQ6AW86 544 aaPredicted RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 MZT2AQ6P582 158 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 USP43Q70EL4 1123 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 UNC13DQ70J99 1090 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ZBTB8BQ8NAP8 495 aaPredicted RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 MBD3L2Q8NHZ7 208 aaPredicted RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 GATA5Q9BWX5 397 aaPredicted RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ARHGAP39Q9C0H5 1083 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 THSD1Q9NS62 852 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms