RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 ALDH18A1P54886 795 aaKnown RBP16.83■□□□□ 0.28
TRIM27-202ENST00000377199 MRPS5P82675 430 aaKnown RBP16.83■□□□□ 0.28
TRIM27-202ENST00000377199 CDK16Q00536 496 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 CES4AQ5XG92 561 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 MTHFD1LQ6UB35 978 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 CATSPER4Q7RTX7 472 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 KHSRPQ92945 711 aaKnown RBP eCLIP16.83■□□□□ 0.288e-10■■□□□ 12.4
TRIM27-202ENST00000377199 OSMRQ99650 979 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 CDHR5Q9HBB8 845 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 SCN1AP35498 2009 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 PAPPA2Q9BXP8 1791 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 WDR27A2RRH5 827 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 APOEP02649 317 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 DESP17661 470 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 ADORA2AP29274 412 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 INCA1Q0VD86 236 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 OLIG2Q13516 323 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 PDK2Q15119 407 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 ZNF484Q5JVG2 852 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 HEATR6Q6AI08 1181 aaKnown RBP16.82■□□□□ 0.28
TRIM27-202ENST00000377199 CCNYQ8ND76 341 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 FBXO27Q8NI29 283 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 MIEF2Q96C03 454 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 OXNAD1Q96HP4 312 aaPredicted RBP16.82■□□□□ 0.28
TRIM27-202ENST00000377199 NSL1Q96IY1 281 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 NXF3Q9H4D5 531 aaKnown RBP16.82■□□□□ 0.28
TRIM27-202ENST00000377199 CREB3O43889 395 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 CCDC22O60826 627 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 PTDSS1P48651 473 aaKnown RBP16.82■□□□□ 0.28
TRIM27-202ENST00000377199 AP1B1Q10567 949 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 ANKRD13AQ8IZ07 590 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 E2F7Q96AV8 911 aa16.82■□□□□ 0.28
TRIM27-202ENST00000377199 KRT36O76013 467 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 AQP5P55064 265 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 SLC18A2Q05940 514 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 GRIK4Q16099 956 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 NME8Q8N427 588 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 PDCD7Q8N8D1 485 aaKnown RBP16.81■□□□□ 0.28
TRIM27-202ENST00000377199 BTBD10Q9BSF8 475 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 C20orf27Q9GZN8 174 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 SUFUQ9UMX1 484 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 LTBP3Q9NS15 1303 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 SMAPO00193 183 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 RFPL1O75677 317 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 TGM2P21980 687 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 GTF2A2P52657 109 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 PITX1P78337 314 aaPredicted RBP16.81■□□□□ 0.28
TRIM27-202ENST00000377199 MXRA7P84157 204 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 RCN1Q15293 331 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 SH2D5Q6ZV89 423 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 PLLPQ9Y342 182 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.81■□□□□ 0.28
TRIM27-202ENST00000377199 WDR90Q96KV7 1748 aa16.81■□□□□ 0.28
TRIM27-202ENST00000377199 L1CAMP32004 1257 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 LAMC2Q13753 1193 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 LGSNQ5TDP6 509 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 SLC35F5Q8WV83 523 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 WDR60Q8WVS4 1066 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 NAF1Q96HR8 494 aaKnown RBP16.8■□□□□ 0.28
TRIM27-202ENST00000377199 CLPTM1LQ96KA5 538 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 AGAP3Q96P47 875 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 KCTD15Q96SI1 283 aaPredicted RBP16.8■□□□□ 0.28
TRIM27-202ENST00000377199 TBCBQ99426 244 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 SHCBP1LQ9BZQ2 653 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 TAS2R1Q9NYW7 299 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 MTO1Q9Y2Z2 717 aaKnown RBP16.8■□□□□ 0.28
TRIM27-202ENST00000377199 C2CD2Q9Y426 696 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 LYPLA1O75608 230 aaPredicted RBP16.8■□□□□ 0.28
TRIM27-202ENST00000377199 KRT38O76015 456 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 DHRS4L1P0CG22 281 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 NME3Q13232 169 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 MUM1Q2TAK8 710 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 TP53INP2Q8IXH6 220 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 SLC2A14Q8TDB8 520 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 PHACTR1Q9C0D0 580 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 CACNG4Q9UBN1 327 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 GJD2Q9UKL4 321 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 GSC2O15499 205 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 KCNA4P22459 653 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 ACAT1P24752 427 aaKnown RBP16.8■□□□□ 0.28
TRIM27-202ENST00000377199 SLC9A4Q6AI14 798 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 C4orf50Q6ZRC1 276 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 ZNF534Q76KX8 674 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 ADAM32Q8TC27 787 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 SKA1Q96BD8 255 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 CDCA5Q96FF9 252 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 FAM161BQ96MY7 647 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 CSPG4P5Q96PW8 444 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 EBF4Q9BQW3 602 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 VRTNQ9H8Y1 702 aa16.8■□□□□ 0.28
TRIM27-202ENST00000377199 ASB14A6NK59 587 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 B2RBV5 119 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 USP12O75317 370 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 SPAG6O75602 509 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 C1QAP02745 245 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 ABCG1P45844 678 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 RPL10AP62906 217 aaKnown RBP16.79■□□□□ 0.28
TRIM27-202ENST00000377199 DCAF6Q58WW2 860 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 TAPT1Q6NXT6 567 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 CDKL3Q8IVW4 592 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms