RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 KPNA6O60684 536 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 OASLQ15646 514 aaKnown RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 NFE2Q16621 373 aaPredicted RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 SEZ6Q53EL9 994 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 ATAD3BQ5T9A4 648 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 SVOPQ8N4V2 548 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 PACSIN1Q9BY11 444 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 KLHL31Q9H511 634 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 DCLRE1BQ9H816 532 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 VPS51Q9UID3 782 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 MAGI3Q5TCQ9 1506 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 STAU1O95793 577 aaKnown RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 CKBP12277 381 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 SKIV2L2P42285 1042 aaKnown RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 NPTX2P47972 431 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 RASA2Q15283 850 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 C11orf63Q6NUN7 778 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 ZBTB49Q6ZSB9 765 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 REPS1Q96D71 796 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 ACOX2Q99424 681 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 DPY30Q9C005 99 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 SPRTNQ9H040 489 aaPredicted RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 RRN3Q9NYV6 651 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 H3BMM5 538 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 NTSR2O95665 410 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 JCHAINP01591 159 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 SLC2A4P14672 509 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 ATP6V1C1P21283 382 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 GRK4P32298 578 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 GCLCP48506 637 aaPredicted RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 INAQ16352 499 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 TYW3Q6IPR3 259 aaKnown RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 RERGLQ9H628 205 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 VTI1BQ9UEU0 232 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 ITGA11Q9UKX5 1188 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 VANGL2Q9ULK5 521 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 DUSP12Q9UNI6 340 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 ABCC3O15438 1527 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 FAM20BO75063 409 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 NFICP08651 508 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 FDPSP14324 419 aaKnown RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 TNNI3P19429 210 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 HNRNPH1P31943 449 aaKnown RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 STARD3Q14849 445 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 NR6A1Q15406 480 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 DDR2Q16832 855 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 CCDC153Q494R4 210 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 IRAK1BP1Q5VVH5 260 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 WDR93Q6P2C0 686 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 ARRDC4Q8NCT1 418 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 OSGEPL1Q9H4B0 414 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 SMIM31A0A1B0GVY4 71 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 CBX4O00257 560 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 TRIM66O15016 1216 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 NKRFO15226 690 aaKnown RBP eCLIP11.84□□□□□ -0.51
VCL-202ENST00000372755 ZW10O43264 779 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 GRTP1Q5TC63 336 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 RSBN1Q5VWQ0 802 aaPredicted RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 EPHX4Q8IUS5 362 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 COLGALT1Q8NBJ5 622 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 MOSPD2Q8NHP6 518 aa11.84□□□□□ -0.51
VCL-202ENST00000372755 ZCCHC2Q9C0B9 1178 aaKnown RBP11.84□□□□□ -0.51
VCL-202ENST00000372755 ADCY10Q96PN6 1610 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 A0A087X0T9 212 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 KLHL41O60662 606 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 BAIAP3O94812 1187 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 FAM228BP0C875 321 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 CLCN3P51790 818 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 PPP4CP60510 307 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 PSMC6P62333 389 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 CYP24A1Q07973 514 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 KCNMA1Q12791 1236 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 GRIK3Q13003 919 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 VPS72Q15906 364 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 Q4G0T1 1027 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 FIGNQ5HY92 759 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 TBCELQ5QJ74 424 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 CASP12Q6UXS9 341 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 MYCBPAPQ8TBZ2 947 aa11.83□□□□□ -0.51
VCL-202ENST00000372755 CDC42EP4Q9H3Q1 356 aaKnown RBP11.83□□□□□ -0.51
VCL-202ENST00000372755 ZMYND8Q9ULU4 1186 aaPredicted RBP11.83□□□□□ -0.51
VCL-202ENST00000372755 RAD51BO15315 384 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 MED24O75448 989 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 HSMCR30P0CW71 290 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 FASP25445 335 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 PTPN4P29074 926 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 IL5RAQ01344 420 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 RETSATQ6NUM9 610 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 ILDR2Q71H61 639 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 NECAB2Q7Z6G3 386 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 PRKD2Q9BZL6 878 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 ZNF862O60290 1169 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 CCNT2O60583 730 aaKnown RBP11.83□□□□□ -0.52
VCL-202ENST00000372755 CAP2P40123 477 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 CD151P48509 253 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 C11orf88Q6PI97 169 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 SNRNP27Q8WVK2 155 aaKnown RBP11.83□□□□□ -0.52
VCL-202ENST00000372755 MAGEB10Q96LZ2 347 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms