RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 UXS1Q8NBZ7 420 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 ATG4AQ8WYN0 398 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 DEPDC7Q96QD5 511 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 OLFML3Q9NRN5 406 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 CYP39A1Q9NYL5 469 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 MROH7Q68CQ1 1323 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 MYO1CO00159 1063 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 CDH16O75309 829 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 GEMIN4P57678 1058 aaKnown RBP10.08□□□□□ -0.8
COL4A6-202ENST00000372216 KYNUQ16719 465 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 GJC2Q5T442 439 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-202ENST00000372216 SV2AQ7L0J3 742 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 PURBQ96QR8 312 aaKnown RBP10.08□□□□□ -0.8
COL4A6-202ENST00000372216 ERP44Q9BS26 406 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 PPCSQ9HAB8 311 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 PARVBQ9HBI1 364 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 SOHLH2Q9NX45 425 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 ADAM21Q9UKJ8 722 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 NFASCO94856 1347 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 EML1O00423 815 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 CHUKO15111 745 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 MSCO60682 206 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 SOAT2O75908 522 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 STIP1P31948 543 aaKnown RBP10.08□□□□□ -0.8
COL4A6-202ENST00000372216 MLH1P40692 756 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 PRIM2P49643 509 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 SPOCD1Q6ZMY3 1216 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 PALB2Q86YC2 1186 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 ARHGEF19Q8IW93 802 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 NACC2Q96BF6 587 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 CNPY3Q9BT09 278 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 IARS2Q9NSE4 1012 aaKnown RBP10.08□□□□□ -0.8
COL4A6-202ENST00000372216 MSRAQ9UJ68 235 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 HPSEQ9Y251 543 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 CDY2AQ9Y6F7 541 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 SPACA6W5XKT8 324 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 CLK2P49760 499 aaKnown RBP10.08□□□□□ -0.8
COL4A6-202ENST00000372216 MAP2K5Q13163 448 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 TPGS1Q6ZTW0 290 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 LEMD2Q8NC56 503 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 SERAC1Q96JX3 654 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 YY1AP1Q9H869 796 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 SYNPO2Q9UMS6 1093 aa10.08□□□□□ -0.8
COL4A6-202ENST00000372216 TRIM66O15016 1216 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 RTN3O95197 1032 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 HNRNPCP07910 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 FAM228BP0C875 321 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 CYP2F1P24903 491 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 POU1F1P28069 291 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 CCR1P32246 355 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 SLC12A3P55017 1021 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 MRPS6P82932 125 aaKnown RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 OTUD4Q01804 1114 aaKnown RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 FAM124AQ86V42 546 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 APBA2Q99767 749 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 MYOCQ99972 504 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 PKD2L2Q9NZM6 624 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 LRRIQ3A6PVS8 624 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 RRM1P23921 792 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 CCR4P51679 360 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 HIRAP54198 1017 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 E2F4Q16254 413 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 USP39Q53GS9 565 aaKnown RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 ERMARDQ5T6L9 678 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 GATAD2AQ86YP4 633 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 POMGNT2Q8NAT1 580 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 RNASE11Q8TAA1 199 aaKnown RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 ZBTB45Q96K62 511 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 MRIQ9BWK5 157 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 INTS13Q9NVM9 706 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 UXTQ9UBK9 157 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 TRPC4Q9UBN4 977 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 GRID1Q9ULK0 1009 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 FRMPD4Q14CM0 1322 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 RNF103O00237 685 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 CYP3A4P08684 503 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 RHBDL3P58872 404 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 MRPS15P82914 257 aaKnown RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 EML3Q32P44 896 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 DET1Q7L5Y6 550 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 BNIPLQ7Z465 357 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 CNPY4Q8N129 248 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 ADGRE3Q9BY15 652 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 CERS4Q9HA82 394 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 CYP4F12Q9HCS2 524 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 NRCAMQ92823 1304 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 FAM83EQ2M2I3 478 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 TREML2Q5T2D2 321 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 MTSS1LQ765P7 747 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 CEP68Q76N32 757 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 KIAA2013Q8IYS2 634 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 KIAA0895Q8NCT3 520 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 FAR2Q96K12 515 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 XPO6Q96QU8 1125 aaKnown RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 MRPL1Q9BYD6 325 aaKnown RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 ETNK1Q9HBU6 452 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 RIC8BQ9NVN3 520 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 UBP1Q9NZI7 540 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 PRKAB1Q9Y478 270 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms