RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 CXCL17Q6UXB2 119 aa14.52□□□□□ -0.08
PCMTD1-201ENST00000360540 PTAR1Q7Z6K3 402 aaPredicted RBP14.52□□□□□ -0.08
PCMTD1-201ENST00000360540 EME1Q96AY2 570 aa14.52□□□□□ -0.08
PCMTD1-201ENST00000360540 C18orf25Q96B23 403 aaPredicted RBP14.52□□□□□ -0.08
PCMTD1-201ENST00000360540 CMTM5Q96DZ9 223 aa14.52□□□□□ -0.08
PCMTD1-201ENST00000360540 SH3GL2Q99962 352 aa14.52□□□□□ -0.08
PCMTD1-201ENST00000360540 FICDQ9BVA6 458 aa14.52□□□□□ -0.08
PCMTD1-201ENST00000360540 CCDC90BQ9GZT6 254 aa14.52□□□□□ -0.08
PCMTD1-201ENST00000360540 ACSS2Q9NR19 701 aa14.52□□□□□ -0.08
PCMTD1-201ENST00000360540 PHGDHO43175 533 aaKnown RBP14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 BUD23O43709 281 aaKnown RBP14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 PDE5AO76074 875 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 MED21Q13503 144 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 CSHL1Q14406 222 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 SZRD1Q7Z422 152 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 TLK2Q86UE8 772 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 TFAP2BQ92481 460 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 ILKAPQ9H0C8 392 aaPredicted RBP14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 LRRC40Q9H9A6 602 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 NT5MQ9NPB1 228 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 WARS2Q9UGM6 360 aaKnown RBP14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 SDK1Q7Z5N4 2213 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 TMEM191CA6NGB0 347 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 VAPBO95292 243 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 NUDT17P0C025 328 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 FDFT1P37268 417 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 ACVR2BQ13705 512 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 PPP1R26Q5T8A7 1209 aaPredicted RBP14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 FOXR2Q6PJQ5 311 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 PIGZQ86VD9 579 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 SHCBP1Q8NEM2 672 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 MUC3BQ9H195 1237 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 TMEM134Q9H6X4 195 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 NOCTQ9UK39 431 aaKnown RBP14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 VANGL2Q9ULK5 521 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 CDY2AQ9Y6F7 541 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 CDY1Q9Y6F8 540 aa14.52□□□□□ -0.09
PCMTD1-201ENST00000360540 GLRA3O75311 464 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 KLHL2O95198 593 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 CHRM3P20309 590 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 LBRQ14739 615 aaKnown RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 ALLCQ8N6M5 410 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 EFCAB3Q8N7B9 438 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 LPPQ93052 612 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 SPATA17Q96L03 361 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 APBA2Q99767 749 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 CENPKQ9BS16 269 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 ABHD16BQ9H3Z7 469 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 LRRC4CQ9HCJ2 640 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 FBXO6Q9NRD1 293 aaPredicted RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 BTBD7Q9P203 1132 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 NR2E3Q9Y5X4 410 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 KNL1Q8NG31 2342 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 MROH7Q68CQ1 1323 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 C2orf71A6NGG8 1288 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 AKAP10O43572 662 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 LYPLA2O95372 231 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 PAEPP09466 180 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 RECQLP46063 649 aaPredicted RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 PHF13Q86YI8 300 aaPredicted RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 CXorf38Q8TB03 319 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 PLEKHO2Q8TD55 490 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 USP13Q92995 863 aaPredicted RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 MRPL1Q9BYD6 325 aaKnown RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 ING2Q9H160 280 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 ARHGAP28Q9P2N2 729 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 ADGRA3Q8IWK6 1321 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 ANGPT2O15123 496 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 FAM155BO75949 473 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 C4BPAP04003 597 aaKnown RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 GOT1P17174 413 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 PSMB4P28070 264 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 TCHHL1Q5QJ38 904 aaPredicted RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 EIF1ADQ8N9N8 165 aaKnown RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 ATXN2LQ8WWM7 1075 aaKnown RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 VPS33BQ9H267 617 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 NXF3Q9H4D5 531 aaKnown RBP14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 CATSPERBQ9H7T0 1116 aa14.51□□□□□ -0.09
PCMTD1-201ENST00000360540 SUPT3HB4E1H0 165 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 SUPT3HO75486 399 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 ZMPSTE24O75844 475 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 PGK1P00558 417 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 TMED1Q13445 227 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 OR52K1Q8NGK4 314 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 FRMD8Q9BZ67 464 aaPredicted RBP14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 SLC17A7Q9P2U7 560 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 MOSPD1Q9UJG1 213 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 GPR25O00155 361 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 ENTPD5O75356 428 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 YBX3P16989 372 aaKnown RBP eCLIP14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 ELF3P78545 371 aaPredicted RBP14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 RARS2Q5T160 578 aaKnown RBP14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 AGAP11Q8TF27 550 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 PRDM12Q9H4Q4 367 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 TNFSF13BQ9Y275 285 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 PPME1Q9Y570 386 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 DCXO43602 365 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 ERBB2P04626 1255 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 TCF4P15884 667 aa14.5□□□□□ -0.09
PCMTD1-201ENST00000360540 BIRC2Q13490 618 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms