RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 KPNA1P52294 538 aaPredicted RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 MARC1Q5VT66 337 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 TRIM69Q86WT6 500 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 MED8Q96G25 268 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 RPS6KB2Q9UBS0 482 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 ALDH5A1P51649 535 aaPredicted RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 CSTF3Q12996 717 aaKnown RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 CYLC2Q14093 348 aaPredicted RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 NYAP1Q6ZVC0 841 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 TLK2Q86UE8 772 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 SLC26A11Q86WA9 606 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 TDRD5Q8NAT2 981 aaKnown RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 BBS2Q9BXC9 721 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 EFCAB1Q9HAE3 211 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 FAM86B1E9PN63 330 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 CCNT2O60583 730 aaKnown RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 RBP1P09455 135 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 FAM86B2P0C5J1 330 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 RRM2P31350 389 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 MCL1Q07820 350 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 EIF2B5Q13144 721 aaKnown RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 KHDRBS2Q5VWX1 349 aaKnown RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 CASP10Q92851 521 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 KIAA1683Q9H0B3 1180 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 ATXN3LQ9H3M9 355 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 IL17RBQ9NRM6 502 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 KANSL3Q9P2N6 904 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 CTNNAL1Q9UBT7 734 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 HPGDP15428 266 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 MAPK9P45984 424 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 ELAVL2Q12926 359 aaKnown RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 BTG3Q14201 252 aaPredicted RBP13.58□□□□□ -0.24
SCN8A-202ENST00000355133 ACTL9Q8TC94 416 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 ACTRT1Q8TDG2 376 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 NDEL1Q9GZM8 345 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 ELOVL6Q9H5J4 265 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 TMEM39AQ9NV64 488 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 ARHGAP20Q9P2F6 1191 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 LACTBL1A8MY62 500 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 RARGP13631 454 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 CPA3P15088 417 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 MSH3P20585 1137 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 OR1E1P30953 314 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 CCNG1P51959 295 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 KCNMA1Q12791 1236 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 CCNG2Q16589 344 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 KDM7AQ6ZMT4 941 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 TRMT11Q7Z4G4 463 aaKnown RBP13.57□□□□□ -0.24
SCN8A-202ENST00000355133 CACUL1Q86Y37 369 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 MCOLN2Q8IZK6 566 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 C3orf20Q8ND61 904 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 FBXO25Q8TCJ0 367 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 PPP1R10Q96QC0 940 aaKnown RBP13.57□□□□□ -0.24
SCN8A-202ENST00000355133 CCDC3Q9BQI4 270 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 LACRTQ9GZZ8 138 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 PTPRHQ9HD43 1115 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 SOX13Q9UN79 622 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 SNX13Q9Y5W8 968 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 KATNA1O75449 491 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 RPLP2P05387 115 aaKnown RBP13.57□□□□□ -0.24
SCN8A-202ENST00000355133 VEGFAP15692 232 aaPredicted RBP13.57□□□□□ -0.24
SCN8A-202ENST00000355133 RAG1P15918 1043 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 TUBP50607 506 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 CHRNB3Q05901 458 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 SLC27A1Q6PCB7 646 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 ZNF438Q7Z4V0 828 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 XPNPEP3Q9NQH7 507 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 KRT84Q9NSB2 600 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 DYRK3O43781 588 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 SERPINI2O75830 405 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 GSTM1P09488 218 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 CDH8P55286 799 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 CNTN2Q02246 1040 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 RCN1Q15293 331 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 VN1R5Q7Z5H4 357 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 ANKRD7Q92527 254 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 NAT9Q9BTE0 207 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 ACTR8Q9H981 624 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 ATP13A1Q9HD20 1204 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 TMCC3Q9ULS5 477 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 RAMP2O60895 175 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 SLITRK3O94933 977 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 RAB27AP51159 221 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 SCUBE3Q8IX30 993 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 KIAA0895Q8NCT3 520 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 PHF21BQ96EK2 531 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 KRCC1Q9NPI7 259 aaPredicted RBP13.57□□□□□ -0.24
SCN8A-202ENST00000355133 MPP6Q9NZW5 540 aa13.57□□□□□ -0.24
SCN8A-202ENST00000355133 IFRD1O00458 451 aaPredicted RBP13.56□□□□□ -0.24
SCN8A-202ENST00000355133 TGFB3P10600 412 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 ATP6V1B2P21281 511 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 ALDH9A1P49189 494 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 RARRES1P49788 294 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 TRIP4Q15650 581 aaPredicted RBP13.56□□□□□ -0.24
SCN8A-202ENST00000355133 OLFML2BQ68BL8 750 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 FAM83AQ86UY5 434 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 ZNF606Q8WXB4 792 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 TMEM120AQ9BXJ8 343 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 TMBIM4Q9HC24 238 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms