RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 OTUD4Q01804 1114 aaKnown RBP21.35■■□□□ 1.01
TRIM4-202ENST00000354241 KRT17Q04695 432 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 TFDP2Q14188 446 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 HLTFQ14527 1009 aaKnown RBP eCLIP21.35■■□□□ 1.011e-9■■■□□ 17.9
TRIM4-202ENST00000354241 BEND5Q7L4P6 421 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 PYROXD2Q8N2H3 581 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 TTC13Q8NBP0 860 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 FAM71BQ8TC56 605 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 GIPC2Q8TF65 315 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 AUTS2Q8WXX7 1259 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 SLCO2A1Q92959 643 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 SPATA17Q96L03 361 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 WDR6Q9NNW5 1121 aaKnown RBP21.35■■□□□ 1.01
TRIM4-202ENST00000354241 FEZ2Q9UHY8 353 aaPredicted RBP21.35■■□□□ 1.01
TRIM4-202ENST00000354241 SLC4A7Q9Y6M7 1214 aa21.35■■□□□ 1.01
TRIM4-202ENST00000354241 CUL1Q13616 776 aa21.34■■□□□ 1.01
TRIM4-202ENST00000354241 BYSLQ13895 437 aaKnown RBP21.34■■□□□ 1.01
TRIM4-202ENST00000354241 EFHC2Q5JST6 749 aa21.34■■□□□ 1.01
TRIM4-202ENST00000354241 DUPD1Q68J44 220 aa21.34■■□□□ 1.01
TRIM4-202ENST00000354241 ACTL9Q8TC94 416 aa21.34■■□□□ 1.01
TRIM4-202ENST00000354241 FBXO32Q969P5 355 aa21.34■■□□□ 1.01
TRIM4-202ENST00000354241 FAM114A2Q9NRY5 505 aa21.34■■□□□ 1.01
TRIM4-202ENST00000354241 MTMR10Q9NXD2 777 aa21.34■■□□□ 1.01
TRIM4-202ENST00000354241 GMIPQ9P107 970 aa21.34■■□□□ 1.01
TRIM4-202ENST00000354241 APOC4-APOC2K7ER74 178 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 FGF18O76093 207 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 GAS8O95995 478 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 APOC2P02655 101 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 GBP1P32455 592 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 TNNT3P45378 269 aaPredicted RBP21.33■■□□□ 1.01
TRIM4-202ENST00000354241 MTMR3Q13615 1198 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 GSTA5Q7RTV2 222 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 MON1AQ86VX9 555 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 VSIG1Q86XK7 387 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 PSTKQ8IV42 348 aaKnown RBP21.33■■□□□ 1.01
TRIM4-202ENST00000354241 HERC6Q8IVU3 1022 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 ARHGAP18Q8N392 663 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 AENQ8WTP8 325 aaKnown RBP21.33■■□□□ 1.01
TRIM4-202ENST00000354241 RNF139Q8WU17 664 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 HERVK_113Q902F9 699 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 RNF34Q969K3 372 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 SLC9A7Q96T83 725 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 HTATIP2Q9BUP3 242 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 IL37Q9NZH6 218 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 AFF4Q9UHB7 1163 aaKnown RBP21.33■■□□□ 1.01
TRIM4-202ENST00000354241 ZNF148Q9UQR1 794 aa21.33■■□□□ 1.01
TRIM4-202ENST00000354241 APOL1O14791 398 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 PECAM1P16284 738 aaPredicted RBP21.33■■□□□ 1
TRIM4-202ENST00000354241 ATF6P18850 670 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 CA8P35219 290 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 DRICH1Q6PGQ1 229 aaPredicted RBP21.33■■□□□ 1
TRIM4-202ENST00000354241 NPNTQ6UXI9 565 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 PCDH19Q8TAB3 1148 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 SEC14L1Q92503 715 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 NTAN1Q96AB6 310 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 GDAP1L1Q96MZ0 367 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 WDCPQ9H6R7 721 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 MRPL17Q9NRX2 175 aaKnown RBP21.33■■□□□ 1
TRIM4-202ENST00000354241 OSER1Q9NX31 292 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 FBXW11Q9UKB1 542 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 NUDT5Q9UKK9 219 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 SNX24Q9Y343 169 aa21.33■■□□□ 1
TRIM4-202ENST00000354241 ZNF487B1APH4 448 aa21.32■■□□□ 1
TRIM4-202ENST00000354241 ADRA1BP35368 520 aa21.32■■□□□ 1
TRIM4-202ENST00000354241 ARL4AP40617 200 aa21.32■■□□□ 1
TRIM4-202ENST00000354241 TUFMP49411 452 aaKnown RBP21.32■■□□□ 1
TRIM4-202ENST00000354241 VCPP55072 806 aaKnown RBP21.32■■□□□ 1
TRIM4-202ENST00000354241 ARL13BQ3SXY8 428 aa21.32■■□□□ 1
TRIM4-202ENST00000354241 C1orf228Q6PIY5 440 aa21.32■■□□□ 1
TRIM4-202ENST00000354241 SYDE1Q6ZW31 735 aaPredicted RBP21.32■■□□□ 1
TRIM4-202ENST00000354241 PQLC3Q8N755 202 aa21.32■■□□□ 1
TRIM4-202ENST00000354241 ZNF461Q8TAF7 563 aa21.32■■□□□ 1
TRIM4-202ENST00000354241 FAF2Q96CS3 445 aa21.32■■□□□ 1
TRIM4-202ENST00000354241 FRMD8P1Q9BZ68 369 aaPredicted RBP21.32■■□□□ 1
TRIM4-202ENST00000354241 SFMBT1Q9UHJ3 866 aa21.32■■□□□ 1
TRIM4-202ENST00000354241 SLC38A8A6NNN8 435 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 TLL1O43897 1013 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 SEC24AO95486 1093 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 ATP2A2P16615 1042 aaKnown RBP21.31■■□□□ 1
TRIM4-202ENST00000354241 GOT1P17174 413 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 CXCR3P49682 368 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 AIF1P55008 147 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 LMNB2Q03252 620 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 TRIP13Q15645 432 aaPredicted RBP21.31■■□□□ 1
TRIM4-202ENST00000354241 SLC35B2Q8TB61 432 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 CASP10Q92851 521 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 CSPG4P5Q96PW8 444 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 RAD9AQ99638 391 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 LBHD1Q9BQE6 289 aaPredicted RBP21.31■■□□□ 1
TRIM4-202ENST00000354241 SMOC2Q9H3U7 446 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 ANLNQ9NQW6 1124 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 COMMD8Q9NX08 183 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 CWC15Q9P013 229 aaKnown RBP21.31■■□□□ 1
TRIM4-202ENST00000354241 ASIC3Q9UHC3 531 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 MAGED2Q9UNF1 606 aaPredicted RBP21.31■■□□□ 1
TRIM4-202ENST00000354241 PLXNA4Q9HCM2 1894 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 FAM92AA1XBS5 289 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 ABLIM3O94929 683 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 IGLV3-25P01717 112 aa21.31■■□□□ 1
TRIM4-202ENST00000354241 LINC00271P0C7V0 271 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms