RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 SOAT2O75908 522 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 NEFHP12036 1026 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 TUSC3Q13454 348 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 SEPT7Q16181 437 aaKnown RBP17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 ECHDC2Q86YB7 292 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 THEM5Q8N1Q8 247 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 DBF4BQ8NFT6 615 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 CELF6Q96J87 481 aaKnown RBP17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 DEFB118Q96PH6 123 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 POPDC2Q9HBU9 364 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 ANK1P16157 1881 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 WDR91A4D1P6 747 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 KBTBD13C9JR72 458 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 GRK4P32298 578 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 IRF5Q13568 498 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 EXOC3L1Q86VI1 746 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 OR10T2Q8NGX3 314 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 LRFN2Q9ULH4 789 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 CCDC78A2IDD5 438 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 EEF2KO00418 725 aaKnown RBP17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 L1CAMP32004 1257 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 CRADDP78560 199 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 XKR4Q5GH76 650 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 LRRTM3Q86VH5 581 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 ZDHHC17Q8IUH5 632 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 ZNF296Q8WUU4 475 aaPredicted RBP17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 PTCH2Q9Y6C5 1203 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 A0A087WUV0 522 aaPredicted RBP17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 A0A1W2PQ45 241 aaPredicted RBP17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 A0A1W2PQY0 241 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 ELK3P41970 407 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 SKOR1P84550 965 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 KLHDC9Q8NEP7 349 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 MYCBPAPQ8TBZ2 947 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 MSI1O43347 362 aaKnown RBP17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 B4GALT3O60512 393 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 AGTP01019 485 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 LTFP02788 710 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 HOXC8P31273 242 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 CA8P35219 290 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 SESN2P58004 480 aaPredicted RBP17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 SLC10A2Q12908 348 aaPredicted RBP17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 DDR2Q16832 855 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 USP33Q8TEY7 942 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 STK32AQ8WU08 396 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 SMARCD1Q96GM5 515 aa17.8■□□□□ 0.44
SMARCC2-202ENST00000347471 DDHD2O94830 711 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 TPI1P60174 286 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 SLC25A52Q3SY17 297 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 C10orf67Q8IYJ2 551 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 ZMIZ2Q8NF64 920 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 RNF139Q8WU17 664 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 UPF3AQ9H1J1 476 aaKnown RBP17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 SFMBT1Q9UHJ3 866 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 GGT7Q9UJ14 662 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 MYO18AQ92614 2054 aaKnown RBP17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 C2CD2LO14523 706 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 EPHB2P29323 1055 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 STX2P32856 288 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 NOS2P35228 1153 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 MGAT3Q09327 533 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 IFT88Q13099 833 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 PTK7Q13308 1070 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 SPARCL1Q14515 664 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 FBF1Q8TES7 1133 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 KLC2Q9H0B6 622 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 EPN3Q9H201 632 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 ETNK1Q9HBU6 452 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 NKIRAS1Q9NYS0 192 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 FAM72CH0Y354 149 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 MFSD11O43934 449 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 HMBSP08397 361 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 VEGFBP49765 207 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 RAB27AP51159 221 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 FAM72AQ5TYM5 149 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 FAM72DQ6L9T8 149 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 FAM72BQ86X60 149 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 ALG13Q9NP73 1137 aaKnown RBP17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 CDH9Q9ULB4 789 aa17.79■□□□□ 0.44
SMARCC2-202ENST00000347471 GMNCA6NCL1 334 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 STIP1P31948 543 aaKnown RBP17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 GRIA1P42261 906 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 GRIK3Q13003 919 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 VPS52Q8N1B4 723 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 TMEM86AQ8N2M4 240 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 URGCPQ8TCY9 931 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 ZNF473Q8WTR7 871 aaKnown RBP17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 RSPH1Q8WYR4 309 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 XPO6Q96QU8 1125 aaKnown RBP17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 WDCPQ9H6R7 721 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 SHOC2Q9UQ13 582 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 CDH16O75309 829 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 USP12O75317 370 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 CPB1P15086 417 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 MBTPS1Q14703 1052 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 PKN2Q16513 984 aaKnown RBP17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 FAM171A1Q5VUB5 890 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 FAM47EQ6ZV65 393 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 PPM1NQ8N819 430 aa17.78■□□□□ 0.44
SMARCC2-202ENST00000347471 ATAD1Q8NBU5 361 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms