RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 LPAR1Q92633 364 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 DTNBP1Q96EV8 351 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 MPP4Q96JB8 637 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 GCNAQ96QF7 691 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 SLC17A6Q9P2U8 582 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 CDH22Q9UJ99 828 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 PACSIN3Q9UKS6 424 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 APOBEC2Q9Y235 224 aaKnown RBP18.4■□□□□ 0.54
VHL-202ENST00000345392 SIN3BO75182 1162 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 CRHR1P34998 444 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 INHBCP55103 352 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 TFAMQ00059 246 aaKnown RBP18.4■□□□□ 0.54
VHL-202ENST00000345392 GHRHRQ02643 423 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 XYLT1Q86Y38 959 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 UNC5BQ8IZJ1 945 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 DEFB107AQ8IZN7 70 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 HIC2Q96JB3 615 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 ZNF668Q96K58 619 aaPredicted RBP18.4■□□□□ 0.54
VHL-202ENST00000345392 DNAJC1Q96KC8 554 aaKnown RBP18.4■□□□□ 0.54
VHL-202ENST00000345392 RSAD1Q9HA92 442 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 MYOZ2Q9NPC6 264 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 LMCD1Q9NZU5 365 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 ATXN10Q9UBB4 475 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 CCNT2O60583 730 aaKnown RBP18.39■□□□□ 0.54
VHL-202ENST00000345392 CDH8P55286 799 aa18.39■□□□□ 0.54
VHL-202ENST00000345392 YWHAEP62258 255 aaKnown RBP18.39■□□□□ 0.54
VHL-202ENST00000345392 TRPC3Q13507 836 aa18.39■□□□□ 0.54
VHL-202ENST00000345392 TTLL12Q14166 644 aaPredicted RBP18.39■□□□□ 0.54
VHL-202ENST00000345392 CDO1Q16878 200 aa18.39■□□□□ 0.54
VHL-202ENST00000345392 RABGAP1LQ5R372 815 aa18.39■□□□□ 0.54
VHL-202ENST00000345392 TEPSINQ96N21 525 aa18.39■□□□□ 0.54
VHL-202ENST00000345392 PNPOQ9NVS9 261 aa18.39■□□□□ 0.54
VHL-202ENST00000345392 POMPQ9Y244 141 aa18.39■□□□□ 0.54
VHL-202ENST00000345392 FER1L6Q2WGJ9 1857 aa18.39■□□□□ 0.53
VHL-202ENST00000345392 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.39■□□□□ 0.53
VHL-202ENST00000345392 CAPN8A6NHC0 703 aa18.39■□□□□ 0.53
VHL-202ENST00000345392 GSRP00390 522 aa18.39■□□□□ 0.53
VHL-202ENST00000345392 FOLH1Q04609 750 aa18.39■□□□□ 0.53
VHL-202ENST00000345392 GRM2Q14416 872 aa18.39■□□□□ 0.53
VHL-202ENST00000345392 WDR78Q5VTH9 848 aa18.39■□□□□ 0.53
VHL-202ENST00000345392 MAVSQ7Z434 540 aa18.39■□□□□ 0.53
VHL-202ENST00000345392 CCDC33Q8N5R6 958 aa18.39■□□□□ 0.53
VHL-202ENST00000345392 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.39■□□□□ 0.53
VHL-202ENST00000345392 PREBQ9HCU5 417 aa18.39■□□□□ 0.53
VHL-202ENST00000345392 NCF2P19878 526 aaPredicted RBP18.38■□□□□ 0.53
VHL-202ENST00000345392 SLC1A6P48664 564 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 C15orf59Q2T9L4 293 aaPredicted RBP18.38■□□□□ 0.53
VHL-202ENST00000345392 TEDDM1Q5T9Z0 273 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 PORCNQ9H237 461 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 SPON1Q9HCB6 807 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 PAK5Q9P286 719 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 PCDHGB4Q9UN71 923 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 PCDHGB5Q9Y5G0 923 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 TRDMT1O14717 391 aaKnown RBP18.38■□□□□ 0.53
VHL-202ENST00000345392 GRIA1P42261 906 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 ASPAP45381 313 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 CHN2P52757 468 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 HMGCS2P54868 508 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 ZNF699Q32M78 642 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 PGM2L1Q6PCE3 622 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 UGT2A3Q6UWM9 527 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 ABHD15Q6UXT9 468 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 DPH6Q7L8W6 267 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 SAMD7Q7Z3H4 446 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 NIM1KQ8IY84 436 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 FNIP1Q8TF40 1166 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 GPATCH2LQ9NWQ4 482 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 PHF24Q9UPV7 400 aa18.38■□□□□ 0.53
VHL-202ENST00000345392 BIRC5O15392 142 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 DKC1O60832 514 aaKnown RBP eCLIP18.37■□□□□ 0.53
VHL-202ENST00000345392 GRAP2O75791 330 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 PIGRP01833 764 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 GMPRP36959 345 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 OSTNP61366 133 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 XKR3Q5GH77 459 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 NBPF12Q5TAG4 269 aaPredicted RBP18.37■□□□□ 0.53
VHL-202ENST00000345392 MBLAC2Q68D91 279 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 DEPDC1BQ8WUY9 529 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 C15orf38-AP3S2A0A0A6YYH1 394 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.37■□□□□ 0.53
VHL-202ENST00000345392 F5H423 210 aaPredicted RBP18.37■□□□□ 0.53
VHL-202ENST00000345392 NAMPTP43490 491 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 CDK18Q07002 472 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 ANKRD20A4Q4UJ75 823 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 N4BP2L1Q5TBK1 243 aaPredicted RBP18.37■□□□□ 0.53
VHL-202ENST00000345392 FRMD7Q6ZUT3 714 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 ARPINQ7Z6K5 226 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 BRSK2Q8IWQ3 736 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 PHTF2Q8N3S3 785 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 ICA1LQ8NDH6 482 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 GPRASP2Q96D09 838 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 INPP5FQ9Y2H2 1132 aa18.37■□□□□ 0.53
VHL-202ENST00000345392 hCG_2014768A0A024R1R8 64 aa18.36■□□□□ 0.53
VHL-202ENST00000345392 KLHL2O95198 593 aa18.36■□□□□ 0.53
VHL-202ENST00000345392 HMGCRP04035 888 aa18.36■□□□□ 0.53
VHL-202ENST00000345392 FGF3P11487 239 aaPredicted RBP18.36■□□□□ 0.53
VHL-202ENST00000345392 ADORA2AP29274 412 aa18.36■□□□□ 0.53
VHL-202ENST00000345392 USP46P62068 366 aa18.36■□□□□ 0.53
VHL-202ENST00000345392 FAM102AQ5T9C2 384 aaPredicted RBP18.36■□□□□ 0.53
VHL-202ENST00000345392 FKBP1CQ5VVH2 108 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms