RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 MINDY3Q9H8M7 445 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 PICK1Q9NRD5 415 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 TMPRSS4Q9NRS4 437 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 FIS1Q9Y3D6 152 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 ASB3Q9Y575 518 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 TPP1O14773 563 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 APOL1O14791 398 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 GPD1P21695 349 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 ARL2P36404 184 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 STXBP2Q15833 593 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.68■□□□□ 0.26
SCARB1-202ENST00000339570 MAP1SQ66K74 1059 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-202ENST00000339570 IL31Q6EBC2 164 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 C10orf107Q8IVU9 208 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 WDR75Q8IWA0 830 aaKnown RBP16.68■□□□□ 0.26
SCARB1-202ENST00000339570 PHTF2Q8N3S3 785 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 CLEC4CQ8WTT0 213 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 KCNK4Q9NYG8 393 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 CNTN3Q9P232 1028 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 SLC15A5A6NIM6 579 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 NOP56O00567 594 aaKnown RBP16.68■□□□□ 0.26
SCARB1-202ENST00000339570 TRPA1O75762 1119 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 ERVK-10P10266 1014 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 UBA1P22314 1058 aaKnown RBP16.68■□□□□ 0.26
SCARB1-202ENST00000339570 LAMB3Q13751 1172 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 NOMO1Q15155 1222 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 MMEL1Q495T6 779 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 SATL1Q86VE3 508 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 CHSY1Q86X52 802 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 ADGRF2Q8IZF7 708 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 PYROXD2Q8N2H3 581 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 SLC4A11Q8NBS3 891 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 GDPD5Q8WTR4 605 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 COPS5Q92905 334 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 GATA6Q92908 595 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 ANKRD27Q96NW4 1050 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 XYLT2Q9H1B5 865 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 ADAMTS6Q9UKP5 1117 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 NFASCO94856 1347 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 KIAA1217Q5T5P2 1943 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 MSCO60682 206 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 PGK2P07205 417 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 HOXC6P09630 235 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 SLC1A6P48664 564 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 CNPY1Q3B7I2 92 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 JADE1Q6IE81 842 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 PAOXQ6QHF9 649 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 ZBTB8OSQ8IWT0 167 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 PCDH19Q8TAB3 1148 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 RNF157Q96PX1 679 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 LGMNQ99538 433 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 RPF1Q9H9Y2 349 aaKnown RBP16.67■□□□□ 0.26
SCARB1-202ENST00000339570 PLAC1Q9HBJ0 212 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 ADGRA2Q96PE1 1338 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 CAPN8A6NHC0 703 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 RAG1P15918 1043 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 CCR10P46092 362 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 TAP1Q03518 808 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 KRT72Q14CN4 511 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 ATF7IP2Q5U623 682 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 STYK1Q6J9G0 422 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 PTAR1Q7Z6K3 402 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-202ENST00000339570 ACOT1Q86TX2 421 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 GALNT4Q8N4A0 578 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 USP13Q92995 863 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-202ENST00000339570 PHF12Q96QT6 1004 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 ACO2Q99798 780 aaKnown RBP16.67■□□□□ 0.26
SCARB1-202ENST00000339570 APOL2Q9BQE5 337 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 DEFB129Q9H1M3 183 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 ACAD9Q9H845 621 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 USP29Q9HBJ7 922 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 NRBP2Q9NSY0 501 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 TXNDC16Q9P2K2 825 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 APPL1Q9UKG1 709 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 TSPAN16Q9UKR8 245 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 SLC4A7Q9Y6M7 1214 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 HMX2A2RU54 273 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 CAPN14A8MX76 684 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 MED7O43513 233 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 BPGMP07738 259 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 NELFEP18615 380 aaKnown RBP16.67■□□□□ 0.26
SCARB1-202ENST00000339570 NDST1P52848 882 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 ACTR3P61158 418 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 EFHC1Q5JVL4 640 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 GJC2Q5T442 439 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-202ENST00000339570 SH2D5Q6ZV89 423 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 C1orf127Q8N9H9 656 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 ZNF778Q96MU6 729 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 PCYT2Q99447 389 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 SNRNP25Q9BV90 132 aaKnown RBP16.67■□□□□ 0.26
SCARB1-202ENST00000339570 CAB39LQ9H9S4 337 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 SSU72Q9NP77 194 aaKnown RBP16.67■□□□□ 0.26
SCARB1-202ENST00000339570 PAK5Q9P286 719 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 KCNG1Q9UIX4 513 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 ZNF214Q9UL59 606 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-202ENST00000339570 SYNPO2Q9UMS6 1093 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 SOX13Q9UN79 622 aa16.67■□□□□ 0.26
SCARB1-202ENST00000339570 LACTBL1A8MY62 500 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 DNAJC6O75061 913 aa16.66■□□□□ 0.26
SCARB1-202ENST00000339570 STIP1P31948 543 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms