RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CACNA2D2Q9NY47 1150 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 CLIC5Q9NZA1 410 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 WDR35Q9P2L0 1181 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 SFMBT1Q9UHJ3 866 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 AGO1Q9UL18 857 aaKnown RBP14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 PCDHB4Q9Y5E5 795 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 PCDHGA5Q9Y5G8 931 aa14.03□□□□□ -0.16
NUDCD3-201ENST00000338427 C4orf47A7E2U8 309 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 CACNG3O60359 315 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 TSPAN3O60637 253 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 ALDH1A2O94788 518 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 ZBED1O96006 694 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 LCP1P13796 627 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 NTSR1P30989 418 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 CORO1AP31146 461 aaKnown RBP14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 CCDC40Q4G0X9 1142 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 SGO2Q562F6 1265 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 IL31Q6EBC2 164 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 PM20D1Q6GTS8 502 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 TTI2Q6NXR4 508 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 ARHGEF19Q8IW93 802 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 ZNF276Q8N554 614 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 XPO6Q96QU8 1125 aaKnown RBP14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 MARK1Q9P0L2 795 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 MARCH2Q9P0N8 246 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 FBXO10Q9UK96 956 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 STARD13Q9Y3M8 1113 aa14.02□□□□□ -0.17
NUDCD3-201ENST00000338427 YJEFN3A6XGL0 299 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 E7ENQ6 273 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 GIPC1O14908 333 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 VDRP11473 427 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 HOXB2P14652 356 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 DGKGP49619 791 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 PSEN1P49768 467 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 COG7P83436 770 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 LRRC63Q05C16 580 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 ADIGQ0VDE8 80 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 MORC3Q14149 939 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 GEN1Q17RS7 908 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 N4BP2L1Q5TBK1 243 aaPredicted RBP14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 FYB2Q5VWT5 728 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 BSPRYQ5W0U4 402 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 RNF43Q68DV7 783 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 PMF1Q6P1K2 205 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 TMEM270Q6UE05 265 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 RSRC2Q7L4I2 434 aaKnown RBP14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 CHPFQ8IZ52 775 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 EHBP1Q8NDI1 1231 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 SORCS1Q8WY21 1168 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 FAXDC2Q96IV6 333 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 SRRTQ9BXP5 876 aaKnown RBP14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 LRRC4Q9HBW1 653 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 CD248Q9HCU0 757 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 CTNND2Q9UQB3 1225 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 NUP205Q92621 2012 aa14.01□□□□□ -0.17
NUDCD3-201ENST00000338427 ATXN2Q99700 1313 aaKnown RBP14□□□□□ -0.17
NUDCD3-201ENST00000338427 O00370 1275 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 PSMA7O14818 248 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 XPO1O14980 1071 aaKnown RBP14□□□□□ -0.17
NUDCD3-201ENST00000338427 ADRB1P08588 477 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 BRD2P25440 801 aaKnown RBP14□□□□□ -0.17
NUDCD3-201ENST00000338427 GOLGA8FQ08AF8 430 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 GOLGA8DPQ0D2H9 430 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 HSF5Q4G112 596 aaPredicted RBP14□□□□□ -0.17
NUDCD3-201ENST00000338427 PKDCCQ504Y2 493 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 CYP2U1Q7Z449 544 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 FMNL3Q8IVF7 1028 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 TTC39CQ8N584 583 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 IPO4Q8TEX9 1081 aaKnown RBP14□□□□□ -0.17
NUDCD3-201ENST00000338427 CLEC4CQ8WTT0 213 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 CEP63Q96MT8 703 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 METTL14Q9HCE5 456 aaKnown RBP14□□□□□ -0.17
NUDCD3-201ENST00000338427 CALCOCO1Q9P1Z2 691 aa14□□□□□ -0.17
NUDCD3-201ENST00000338427 CNOT1A5YKK6 2376 aaKnown RBP13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 GOLGA6L7A0A1B0GV03 622 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 LNP1A1A4G5 178 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 CDX4O14627 284 aaPredicted RBP13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 MSI1O43347 362 aaKnown RBP13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 PENKP01210 267 aaPredicted RBP13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 NDUFV2P19404 249 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 ITPKAP23677 461 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 LIMK1P53667 647 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 BCAT1P54687 386 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 MFAP3P55082 362 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 BST2Q10589 180 aaKnown RBP13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 KCNH2Q12809 1159 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 STIM1Q13586 685 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 CAMK4Q16566 473 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 TMEM215Q68D42 235 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 LCLAT1Q6UWP7 414 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 LPCAT2Q7L5N7 544 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 ELOA2Q8IYF1 753 aaPredicted RBP13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 PPM1KQ8N3J5 372 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 KCNV2Q8TDN2 545 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 SLC35F5Q8WV83 523 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 PIWIL1Q96J94 861 aaKnown RBP13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 KREMEN1Q96MU8 473 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 NT5C1BQ96P26 610 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 MED15Q96RN5 788 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 EDEM2Q9BV94 578 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms