RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 ZNF778Q96MU6 729 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 RNF19AQ9NV58 838 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 ZDHHC7Q9NXF8 308 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 FAM198AQ9UFP1 575 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 TCEAL9Q9UHQ7 104 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 GNEQ9Y223 722 aaKnown RBP11.49□□□□□ -0.57
CCDC87-201ENST00000333861 CEPT1Q9Y6K0 416 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 CROCCQ5TZA2 2017 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 LTBP1Q14766 1721 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 USP34Q70CQ2 3546 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 ADAM23O75077 832 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 CSPG5O95196 566 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 CSH1P0DML2 217 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 CSH2P0DML3 217 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 PAX3P23760 479 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 CA8P35219 290 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 RFC1P35251 1148 aaPredicted RBP11.49□□□□□ -0.57
CCDC87-201ENST00000333861 CRKP46108 304 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 SLC5A3P53794 718 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 FRMD7Q6ZUT3 714 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 RELL1Q8IUW5 271 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 TRIML2Q8N7C3 387 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 TTC13Q8NBP0 860 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 FEZF2Q8TBJ5 459 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 TMEM143Q96AN5 459 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 APOPT1Q96IL0 206 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 CAAP1Q9H8G2 361 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 SPON1Q9HCB6 807 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 RRN3Q9NYV6 651 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 TBX20Q9UMR3 447 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 QSER1Q2KHR3 1735 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 DCXO43602 365 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 THRAP10827 490 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 CD19P15391 556 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 SERPINB5P36952 375 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 PHKA2P46019 1235 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 NOMO3P69849 1222 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 ITGA9Q13797 1035 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 MAP7D1Q3KQU3 841 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 XKR5Q6UX68 686 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 LPCAT2Q7L5N7 544 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 NANOGNBQ7Z5D8 188 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 NIM1KQ8IY84 436 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 TNS4Q8IZW8 715 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 OGFOD1Q8N543 542 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 ATP11CQ8NB49 1132 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
CCDC87-201ENST00000333861 GPAMQ9HCL2 828 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 TUFT1Q9NNX1 390 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 EBF1Q9UH73 591 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 ZNRF3Q9ULT6 936 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 DMTF1Q9Y222 760 aa11.49□□□□□ -0.57
CCDC87-201ENST00000333861 BRCA2P51587 3418 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 hCG_1818297A0A087WSY0 165 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 FBP2O00757 339 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 PEX10O60683 326 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 ZC3H11AO75152 810 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC87-201ENST00000333861 SAT1P21673 171 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 ARRB2P32121 409 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 CDH8P55286 799 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 HDAC4P56524 1084 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 PPP2R5DQ14738 602 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 TMEM214Q6NUQ4 689 aaKnown RBP11.48□□□□□ -0.57
CCDC87-201ENST00000333861 ELMSAN1Q6PJG2 1045 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 CRLF3Q8IUI8 442 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 PPP1R16BQ96T49 567 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 CCDC28BQ9BUN5 200 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 WWP1Q9H0M0 922 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 ACSS3Q9H6R3 686 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 FAIMQ9NVQ4 179 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 KCNK4Q9NYG8 393 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 SCN9AQ15858 1988 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 A0A0B4J269 797 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 J3QRK9 145 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 NOP56O00567 594 aaKnown RBP11.48□□□□□ -0.57
CCDC87-201ENST00000333861 VNN1O95497 513 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 APRTP07741 180 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 DHRS4L1P0CG22 281 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 GSTT2P0CG29 244 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 GSTT2BP0CG30 244 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 LIN9Q5TKA1 542 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 DNAJC24Q6P3W2 148 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 DARS2Q6PI48 645 aaKnown RBP11.48□□□□□ -0.57
CCDC87-201ENST00000333861 ANO5Q75V66 913 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 NUP93Q8N1F7 819 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 ARFGAP1Q8N6T3 406 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 FBXL8Q96CD0 374 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 FAF2Q96CS3 445 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 CCT7Q99832 543 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 HAPLN2Q9GZV7 340 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 TMEM8AQ9HCN3 771 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 RAB6BQ9NRW1 208 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 TRNAU1APQ9NX07 287 aaKnown RBP11.48□□□□□ -0.57
CCDC87-201ENST00000333861 NXF1Q9UBU9 619 aaKnown RBP11.48□□□□□ -0.57
CCDC87-201ENST00000333861 HERC5Q9UII4 1024 aaKnown RBP11.48□□□□□ -0.57
CCDC87-201ENST00000333861 FIS1Q9Y3D6 152 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 TSC22D4Q9Y3Q8 395 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 GAKO14976 1311 aa11.48□□□□□ -0.57
CCDC87-201ENST00000333861 HTR3EA5X5Y0 456 aa11.47□□□□□ -0.57
CCDC87-201ENST00000333861 H7C0C1 242 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms