RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 HTR7P34969 479 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 GRAMD1BQ3KR37 738 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 FAM131BQ86XD5 332 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 SNX31Q8N9S9 440 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 SLC2A14Q8TDB8 520 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 HTR3CQ8WXA8 447 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 HTATIP2Q9BUP3 242 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 KCTD10Q9H3F6 313 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 ADA2Q9NZK5 511 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 ASTN2O75129 1339 aaPredicted RBP11.76□□□□□ -0.53
COL4A5-201ENST00000328300 ZNF541Q9H0D2 1346 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 POMCP01189 267 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 CSH1P0DML2 217 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 CSH2P0DML3 217 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 KCNJ1P48048 391 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 PAN2Q504Q3 1202 aaKnown RBP11.76□□□□□ -0.53
COL4A5-201ENST00000328300 GRTP1Q5TC63 336 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 ANKRD52Q8NB46 1076 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 EPS8L1Q8TE68 723 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 ZNF473Q8WTR7 871 aaKnown RBP11.76□□□□□ -0.53
COL4A5-201ENST00000328300 TRAPPC12Q8WVT3 735 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 LZICQ8WZA0 190 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 MAGEB18Q96M61 343 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 CYLDQ9NQC7 956 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 COL1A1P02452 1464 aaPredicted RBP11.76□□□□□ -0.53
COL4A5-201ENST00000328300 TRDMT1O14717 391 aaKnown RBP11.76□□□□□ -0.53
COL4A5-201ENST00000328300 B4GALT4O60513 344 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 IGSF6O95976 241 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 NPR3P17342 541 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 TNFRSF8P28908 595 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 ZNF143P52747 638 aaPredicted RBP11.76□□□□□ -0.53
COL4A5-201ENST00000328300 LRRC14Q15048 493 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 NT5DC3Q86UY8 548 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 CLPBQ9H078 707 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 SLC39A10Q9ULF5 831 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 GLP2RO95838 553 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 AKAP5P24588 427 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 MED21Q13503 144 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 PGBD3Q8N328 593 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 LACRTQ9GZZ8 138 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 ILKAPQ9H0C8 392 aaPredicted RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 MRPL17Q9NRX2 175 aaKnown RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 MEFVO15553 781 aaPredicted RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 DUSP11O75319 330 aaKnown RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 PMPCBO75439 489 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 MMP3P08254 477 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 ARL4DP49703 201 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 CUL3Q13618 768 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 KRT72Q14CN4 511 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 PDPK2PQ6A1A2 396 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 ACTL9Q8TC94 416 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 SYT17Q9BSW7 474 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 ZCCHC17Q9NP64 241 aaKnown RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 DOLKQ9UPQ8 538 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 SYF2O95926 243 aaKnown RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 POU4F1Q01851 419 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 STX5Q13190 355 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 LVRNQ6Q4G3 990 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 CCT8L2Q96SF2 557 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 PLA2G4CQ9UP65 541 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 O00370 1275 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 DAB1O75553 588 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 FAM107AO95990 144 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 KLRC2P26717 231 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 STARD3Q14849 445 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 CBWD6Q4V339 395 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 CBWD3Q5JTY5 395 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 CBWD5Q5RIA9 395 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 TSHZ1Q6ZSZ6 1077 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 DEFB106AQ8N104 65 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 MTMR8Q96EF0 704 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 LHX5Q9H2C1 402 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 H3BMM5 538 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 FZD9O00144 591 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 HSPA1AP0DMV8 641 aaKnown RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 HSPA1BP0DMV9 641 aaKnown RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 ITIH4Q14624 930 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 COLGALT1Q8NBJ5 622 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 PHACTR1Q9C0D0 580 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 TMBIM4Q9HC24 238 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 OSGEPQ9NPF4 335 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 ANLNQ9NQW6 1124 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 EIF3LQ9Y262 564 aaKnown RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 Q9Y3F1 56 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 RWDD3Q9Y3V2 267 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 PCDHA2Q9Y5H9 948 aa11.75□□□□□ -0.53
COL4A5-201ENST00000328300 MAFBQ9Y5Q3 323 aaPredicted RBP11.75□□□□□ -0.53
COL4A5-201ENST00000328300 RBAK-RBAKDNI3L0D1 243 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 CLK2P49760 499 aaKnown RBP11.74□□□□□ -0.53
COL4A5-201ENST00000328300 KCNK10P57789 538 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 DNAJC3Q13217 504 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 TREML2Q5T2D2 321 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 FAM161BQ96MY7 647 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 ASB2Q96Q27 587 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 FICDQ9BVA6 458 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 SEPT3Q9UH03 358 aa11.74□□□□□ -0.53
COL4A5-201ENST00000328300 ZSCAN5CA6NGD5 496 aaPredicted RBP11.74□□□□□ -0.53
COL4A5-201ENST00000328300 SNUPNO95149 360 aaKnown RBP11.74□□□□□ -0.53
COL4A5-201ENST00000328300 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms